Factsheet for GSMUA_Achr6P14470_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	67.36	68.79
GSMUA_Achr7P13900_001	Banana	cytosol	63.19	61.9
GSMUA_Achr3P15460_001	Banana	cytosol	54.17	56.93
VIT_12s0028g02190.t01	Wine grape	cytosol	53.47	52.74
KRH22286	Soybean	cytosol	50.69	51.41
KRH27043	Soybean	cytosol	50.69	51.41
TraesCS3B01G329600.1	Wheat	cytosol	50.0	48.65
TraesCS3D01G295000.1	Wheat	cytosol	49.31	47.97
Zm00001d043403_P001	Maize	cytosol	50.0	46.45
Os01t0758000-00	Rice	cytosol	48.61	45.75
HORVU3Hr1G072940.2	Barley	cytosol	49.31	45.22
EES03638	Sorghum	cytosol	49.31	44.1
AT1G06330.1	Thale cress	cytosol	45.83	44.0
CDY06206	Canola	cytosol	45.83	43.71
GSMUA_Achr2P10210_001	Banana	cytosol	44.44	43.24
Solyc07g055010.2.1	Tomato	extracellular	45.14	43.05
Bra032428.1-P	Field mustard	cytosol	46.53	42.95
GSMUA_Achr11P...	Banana	cytosol	34.72	37.88
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	29.86	37.39
GSMUA_Achr10P...	Banana	cytosol	32.64	32.19
GSMUA_Achr3P27280_001	Banana	cytosol	30.56	31.88
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	32.64	31.54
GSMUA_Achr4P01830_001	Banana	cytosol	32.64	31.54
GSMUA_Achr3P04460_001	Banana	cytosol	32.64	31.54
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	33.33	30.97
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	31.25	29.03
GSMUA_Achr7P11680_001	Banana	cytosol	29.17	28.19
GSMUA_Achr2P07910_001	Banana	cytosol	28.47	27.15
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	35.42	26.7
GSMUA_Achr11P...	Banana	cytosol	34.03	26.49
GSMUA_Achr1P00790_001	Banana	cytosol	33.33	24.49
GSMUA_Achr1P12840_001	Banana	cytosol	24.31	23.18
CDY09978	Canola	cytosol	46.53	22.95

Protein Annotations

EnsemblPlants:GSMUA_Achr6P14470_001	EnsemblPlants:GSMUA_Achr6T14470_001	EnsemblPlantsGene:GSMUA_Achr6G14470_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF112	PFAM:PF00403	PFscan:PS50846	SUPFAM:SSF55008
UniParc:UPI0002964892	UniProt:M0T6Z5	MapMan:35.1	:	:	:

Description

Putative heavy metal-associated domain containing protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G14470_001]

Coordinates

chr6:-:9597274..9597775

Molecular Weight (calculated)

16374.5 Da

IEP (calculated)

6.937

GRAVY (calculated)

-0.483

Length

144 amino acids

Sequence
(BLAST)

001: MVEMWVHIDC PGCENKIRKA LSKLQGVDAV EIDMAMQKVT VIGWADQKKV LEAVRKTRCT AVLCPYPLNA ETNVQAQEYY HLQHPTPAHR LLFNVAPRSY
101: NYHKHGYDDS SLHGYYQEPA QTHIIGDDAR ARFSDDNPTA CSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.