Factsheet for Zm00001d043403_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03638	Sorghum	cytosol	88.39	85.09
Os01t0758000-00	Rice	cytosol	76.13	77.12
TraesCS3D01G295000.1	Wheat	cytosol	69.68	72.97
TraesCS3B01G329600.1	Wheat	cytosol	69.68	72.97
HORVU3Hr1G072940.2	Barley	cytosol	68.39	67.52
GSMUA_Achr3P15460_001	Banana	cytosol	52.26	59.12
GSMUA_Achr7P13900_001	Banana	cytosol	52.26	55.1
GSMUA_Achr10P...	Banana	cytosol	47.1	51.77
KRH22286	Soybean	cytosol	46.45	50.7
GSMUA_Achr6P14470_001	Banana	cytosol	46.45	50.0
KRH27043	Soybean	cytosol	45.81	50.0
AT1G06330.1	Thale cress	cytosol	46.45	48.0
VIT_12s0028g02190.t01	Wine grape	cytosol	45.16	47.95
Bra032428.1-P	Field mustard	cytosol	45.16	44.87
Solyc07g055010.2.1	Tomato	extracellular	43.23	44.37
CDY06206	Canola	cytosol	43.23	44.37
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	30.97	41.74
Zm00001d051472_P001	Maize	mitochondrion	38.06	39.33
Zm00001d046169_P001	Maize	cytosol	43.87	37.57
Zm00001d004138_P001	Maize	cytosol	32.26	32.26
Zm00001d005656_P001	Maize	mitochondrion	32.26	31.06
Zm00001d020257_P001	Maize	cytosol	32.26	30.86
Zm00001d032291_P001	Maize	cytosol	28.39	30.56
Zm00001d027720_P001	Maize	cytosol	30.32	30.13
Zm00001d034978_P001	Maize	cytosol	27.1	27.81
Zm00001d052760_P001	Maize	cytosol	26.45	27.15
Zm00001d027405_P001	Maize	plastid	31.61	25.26
CDY09978	Canola	cytosol	43.87	23.29
Zm00001d018075_P001	Maize	mitochondrion	24.52	20.54

Protein Annotations

EnsemblPlants:Zm00001d043403_P001	EnsemblPlants:Zm00001d043403_T001	EnsemblPlantsGene:Zm00001d043403	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF107	PFAM:PF00403	PFscan:PS50846	ProteinID:ONM37763.1
SEG:seg	SUPFAM:SSF55008	UniParc:UPI000221F542	UniProt:A0A1D6NB47	MapMan:35.1	:

Description

Heavy metal transport/detoxification superfamily protein

Coordinates

chr3:+:198911644..198912362

Molecular Weight (calculated)

16480.4 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.371

Length

155 amino acids

Sequence
(BLAST)

001: MTLVEMCVHM DCPGCEKKIR KAVQRLEGVH DVEVDMAQQK VTVSGDVEQK KVLKAVRRTG RRAVLWPLPY AAGAAAGAAH VLAQQQPAAG AGAGAGPAHA
101: SHAARPTSSY NYYKHGYDDS SLYGAYYHHG ANSAVAGTRS TDYFSDENAQ GCSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.