Factsheet for GSMUA_Achr3P15460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	64.96	63.12
GSMUA_Achr7P13900_001	Banana	cytosol	64.23	59.86
Os01t0758000-00	Rice	cytosol	66.42	59.48
TraesCS3B01G329600.1	Wheat	cytosol	62.77	58.11
TraesCS3D01G295000.1	Wheat	cytosol	62.04	57.43
VIT_12s0028g02190.t01	Wine grape	cytosol	59.12	55.48
KRH22286	Soybean	cytosol	56.93	54.93
KRH27043	Soybean	cytosol	56.2	54.23
GSMUA_Achr6P14470_001	Banana	cytosol	56.93	54.17
HORVU3Hr1G072940.2	Barley	cytosol	62.04	54.14
EES03638	Sorghum	cytosol	62.77	53.42
Zm00001d043403_P001	Maize	cytosol	59.12	52.26
AT1G06330.1	Thale cress	cytosol	55.47	50.67
CDY06206	Canola	cytosol	53.28	48.34
Solyc07g055010.2.1	Tomato	extracellular	53.28	48.34
Bra032428.1-P	Field mustard	cytosol	53.28	46.79
GSMUA_Achr2P10210_001	Banana	cytosol	48.91	45.27
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	35.04	41.74
GSMUA_Achr11P...	Banana	cytosol	38.69	40.15
GSMUA_Achr3P27280_001	Banana	cytosol	37.23	36.96
GSMUA_Achr10P...	Banana	cytosol	37.23	34.93
GSMUA_Achr4P01830_001	Banana	cytosol	36.5	33.56
GSMUA_Achr3P04460_001	Banana	cytosol	36.5	33.56
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	37.96	33.55
GSMUA_Achr7P11680_001	Banana	cytosol	35.04	32.21
GSMUA_Achr3P07890_001	Banana	cytosol, mitochondrion, plastid	35.04	32.21
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	35.04	30.97
GSMUA_Achr2P07910_001	Banana	cytosol	32.12	29.14
GSMUA_Achr1P12840_001	Banana	cytosol	31.39	28.48
GSMUA_Achr11P...	Banana	cytosol	37.96	28.11
GSMUA_Achr1P00790_001	Banana	cytosol	39.42	27.55
GSMUA_Achr2P10220_001	Banana	mitochondrion, plastid	37.96	27.23
CDY09978	Canola	cytosol	53.28	25.0

Protein Annotations

EnsemblPlants:GSMUA_Achr3P15460_001	EnsemblPlants:GSMUA_Achr3T15460_001	EnsemblPlantsGene:GSMUA_Achr3G15460_001	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF112	PFAM:PF00403	PFscan:PS50846	SEG:seg
SUPFAM:SSF55008	UniParc:UPI000295A62C	UniProt:M0SEW2	MapMan:35.1	:	:

Description

heavy metal-associated domain containing protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G15460_001]

Coordinates

chr3:+:16499807..16500755

Molecular Weight (calculated)

15495.2 Da

IEP (calculated)

8.323

GRAVY (calculated)

-0.768

Length

137 amino acids

Sequence
(BLAST)

001: MCVHMDCAGC ESKIRKALQK LEGVDNVEID MGSQKVTVTG YVDQKKVLKA VRRTGRRAVL WPYQYSAEQH HTFNHQYHQH HPALAQAGVS GPSSSYNYYK
101: HGYDDSRIHG YYQQPAMTGN RTGDIFSDEN PNACSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.