CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043403_P001	Maize	cytosol	85.09	88.39
Os01t0758000-00	Rice	cytosol	75.16	79.08
TraesCS3D01G295000.1	Wheat	cytosol	69.57	75.68
TraesCS3B01G329600.1	Wheat	cytosol	69.57	75.68
HORVU3Hr1G072940.2	Barley	cytosol	67.08	68.79
GSMUA_Achr3P15460_001	Banana	cytosol	53.42	62.77
GSMUA_Achr7P13900_001	Banana	cytosol	52.17	57.14
GSMUA_Achr10P...	Banana	cytosol	45.96	52.48
KRH22286	Soybean	cytosol	45.34	51.41
KRH27043	Soybean	cytosol	44.72	50.7
AT1G06330.1	Thale cress	cytosol	45.96	49.33
GSMUA_Achr6P14470_001	Banana	cytosol	44.1	49.31
VIT_12s0028g02190.t01	Wine grape	cytosol	44.1	48.63
Bra032428.1-P	Field mustard	cytosol	45.34	46.79
CDY06206	Canola	cytosol	43.48	46.36
Solyc07g055010.2.1	Tomato	extracellular	42.86	45.7
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	30.43	42.61
OQU85626	Sorghum	mitochondrion	37.89	36.97
EER89887	Sorghum	cytosol	45.34	36.14
EER99736	Sorghum	cytosol	34.16	32.74
EER96651	Sorghum	cytosol	32.3	32.3
EES11880	Sorghum	cytosol	31.06	32.26
EES13808	Sorghum	cytosol	28.57	31.72
EER92834	Sorghum	cytosol	30.43	31.41
EES14354	Sorghum	cytosol	27.33	29.14
EER92967	Sorghum	plastid	29.81	24.74
CDY09978	Canola	cytosol	44.1	24.32
KXG30743	Sorghum	plastid	25.47	23.16
KXG39011	Sorghum	cytosol	25.47	19.71

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8075605	UniProt:C5XKS2	EnsemblPlants:EES03638	ProteinID:EES03638
ProteinID:EES03638.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF107	EnsemblPlantsGene:SORBI_3003G301600	SUPFAM:SSF55008
UniParc:UPI0001A84C98	RefSeq:XP_002458518.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:63236423..63237363

Molecular Weight (calculated)

17277.5 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.347

Length

161 amino acids

Sequence
(BLAST)

001: MTLVEMCVHM DCPGCEKKIR KAVQRLEGVH DVEIDMAQQK VTVNGDVEQK KVLKAVRRTG RRAVLWPLPY APAGAAAGGA GAGAAHVLAH QQLMYQPGAA
101: GLAAHASHAA RPASSYNYYK HGYDDSRMYG AYYHHGANSA VAGTRATDYF SDENAQGCSV M

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.