CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G186900.1	Wheat	cytosol	70.24	72.84
TraesCS2D01G168000.1	Wheat	cytosol	69.05	71.6
TraesCS2A01G160700.1	Wheat	cytosol	69.05	71.6
VIT_07s0031g01160.t01	Wine grape	cytosol	63.69	70.86
Os03t0383900-01	Rice	cytosol	63.69	68.15
Bra011840.1-P	Field mustard	cytosol	63.69	67.72
CDX86196	Canola	cytosol	63.69	67.72
CDY42647	Canola	cytosol	63.69	67.72
CDY41999	Canola	cytosol	63.69	67.72
KRH43240	Soybean	cytosol	61.31	67.32
KRH59402	Soybean	cytosol	60.71	66.67
EER96651	Sorghum	cytosol	63.69	66.46
Solyc04g054500.2.1	Tomato	cytosol	58.93	65.13
AT4G39700.1	Thale cress	cytosol	60.71	64.56
PGSC0003DMT400056666	Potato	cytosol	58.33	64.47
KRG97609	Soybean	cytosol	60.12	64.33
KRH31264	Soybean	cytosol	58.93	63.87
EES13808	Sorghum	cytosol	54.17	62.76
GSMUA_Achr7P11680_001	Banana	cytosol	55.36	62.42
PGSC0003DMT400056199	Potato	cytosol	57.14	62.34
Solyc05g051820.2.1	Tomato	cytosol	56.55	61.69
EES11880	Sorghum	cytosol	47.02	50.97
EES14354	Sorghum	cytosol	44.64	49.67
EER92834	Sorghum	cytosol	42.86	46.15
KXG30743	Sorghum	plastid	38.69	36.72
EES03638	Sorghum	cytosol	32.74	34.16
OQU85626	Sorghum	mitochondrion	29.76	30.3
EER92967	Sorghum	plastid	33.33	28.87
KXG39011	Sorghum	cytosol	29.76	24.04
EER89887	Sorghum	cytosol	27.38	22.77

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	EntrezGene:8079347	UniProt:C5X2K4	EnsemblPlants:EER99736	ProteinID:EER99736
ProteinID:EER99736.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0030001
GO:GO:0046872	GO:GO:0046914	GO:GO:0046916	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PFAM:PF00403	PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF165	EnsemblPlantsGene:SORBI_3002G382500	SUPFAM:SSF55008
UniParc:UPI0001A83E38	RefSeq:XP_002463215.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73844368..73846343

Molecular Weight (calculated)

18175.8 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.498

Length

168 amino acids

Sequence
(BLAST)

001: MGGTLEYLSG LLGVGGSGSH DHENKKKKRK QLQTVELKVR MDCEGCELKV RSTLSSMKGV ESVEINRKQQ KVTVVGYVEA TKVLKKAQST GKKAELWPYV
101: PYNLVAQPYV AGTYDKRAPP GYVRSVEPAA GYVVAASSQL QAAAGGRPPG DHLTDMFNDE NPNSCSVM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.