Factsheet for TraesCS2B01G186900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G168000.1	Wheat	cytosol	98.77	98.77
TraesCS2A01G160700.1	Wheat	cytosol	98.77	98.77
EER99736	Sorghum	cytosol	72.84	70.24
Os03t0383900-01	Rice	cytosol	63.58	65.61
Bra011840.1-P	Field mustard	cytosol	62.96	64.56
CDX86196	Canola	cytosol	62.96	64.56
CDY41999	Canola	cytosol	62.96	64.56
CDY42647	Canola	cytosol	62.96	64.56
VIT_07s0031g01160.t01	Wine grape	cytosol	59.88	64.24
KRH59402	Soybean	cytosol	60.49	64.05
KRH43240	Soybean	cytosol	60.49	64.05
PGSC0003DMT400056666	Potato	cytosol	59.26	63.16
Solyc04g054500.2.1	Tomato	cytosol	58.64	62.5
AT4G39700.1	Thale cress	cytosol	60.49	62.03
TraesCS5B01G191700.1	Wheat	cytosol	60.49	60.87
GSMUA_Achr7P11680_001	Banana	cytosol	55.56	60.4
KRH31264	Soybean	cytosol	57.41	60.0
PGSC0003DMT400056199	Potato	cytosol	55.56	58.44
TraesCS4B01G105100.1	Wheat	mitochondrion, plastid	52.47	57.43
Solyc05g051820.2.1	Tomato	cytosol	54.32	57.14
KRG97609	Soybean	cytosol	54.94	56.69
TraesCS2B01G304100.1	Wheat	cytosol	47.53	50.99
TraesCS2B01G077100.1	Wheat	cytosol, plastid	47.53	49.68
TraesCS3B01G238100.1	Wheat	cytosol	28.4	46.0
TraesCS5B01G242000.1	Wheat	cytosol	42.59	45.39
TraesCS7B01G285400.1	Wheat	mitochondrion, plastid	42.59	42.86
TraesCS6B01G059000.1	Wheat	cytosol	40.12	40.88
TraesCS6B01G332000.2	Wheat	cytosol	40.12	40.12
TraesCS6B01G287000.1	Wheat	mitochondrion	30.86	32.89
TraesCS3B01G329600.1	Wheat	cytosol	27.16	29.73
TraesCS4B01G348900.1	Wheat	plastid	33.33	27.69
TraesCS1B01G215100.1	Wheat	cytosol, plastid	33.33	27.41
TraesCS7B01G237800.1	Wheat	cytosol	25.93	24.71

Protein Annotations

Gene3D:3.30.70.100	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810	GO:GO:0008150
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	PFAM:PF00403
PFscan:PS50846	PANTHER:PTHR22814	PANTHER:PTHR22814:SF171	SUPFAM:SSF55008	EnsemblPlantsGene:TraesCS2B01G186900	EnsemblPlants:TraesCS2B01G186900.1
TIGR:cd00371	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:161472834..161474533

Molecular Weight (calculated)

17597.9 Da

IEP (calculated)

9.989

GRAVY (calculated)

-0.721

Length

162 amino acids

Sequence
(BLAST)

001: MGVGGTLEYL SGLLGGGGGH GHGHGHGNRR RRKQMQTVEL KVSMDCEGCE RKVKNALSSM KGVRSVNINR KQQKVTVAGY VEASKVLRKA QSTGKKAEIW
101: PYVPYSQVSQ PYVAGTYDKR APAGYVRSQE PGYGNVSGQV SRQDDQLTDM FNDDNANSCA VM

Best Arabidopsis Sequence Match ( AT4G39700.1 )
(BLAST)

001: MGVGGTLEYI SELIGNGGSH SYGKRKKKKQ FQTVELKVRM DCDGCVLKIK NSLSSLKGVK TVEINKKQQK VTVSGYADAS KVLKKAKATG KKAEIWPYVP
101: YNLVAQPYIA QAYDKKAPPG YVRKVDPNVT TGTMAVYYDD PSYTSLFSDD NPNACSIM

Arabidopsis Description

HIPP23Heavy metal-associated isoprenylated plant protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O65657]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.