Factsheet for TraesCS2D01G168000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G186900.1	Wheat	cytosol	98.77	98.77
TraesCS2A01G160700.1	Wheat	cytosol	97.53	97.53
EER99736	Sorghum	cytosol	71.6	69.05
KRH43240	Soybean	cytosol	61.11	64.71
KRH59402	Soybean	cytosol	61.11	64.71
Bra011840.1-P	Field mustard	cytosol	62.96	64.56
CDX86196	Canola	cytosol	62.96	64.56
CDY41999	Canola	cytosol	62.96	64.56
CDY42647	Canola	cytosol	62.96	64.56
Os03t0383900-01	Rice	cytosol	62.35	64.33
Solyc04g054500.2.1	Tomato	cytosol	59.26	63.16
PGSC0003DMT400056666	Potato	cytosol	59.26	63.16
VIT_07s0031g01160.t01	Wine grape	cytosol	58.64	62.91
TraesCS5D01G199500.1	Wheat	cytosol	61.73	62.5
AT4G39700.1	Thale cress	cytosol	60.49	62.03
GSMUA_Achr7P11680_001	Banana	cytosol	55.56	60.4
KRH31264	Soybean	cytosol	57.41	60.0
PGSC0003DMT400056199	Potato	cytosol	54.94	57.79
TraesCS4D01G102000.1	Wheat	mitochondrion, plastid	51.85	56.76
KRG97609	Soybean	cytosol	54.94	56.69
Solyc05g051820.2.1	Tomato	cytosol	53.7	56.49
TraesCS2D01G285700.1	Wheat	cytosol	48.15	51.66
TraesCS2D01G063000.1	Wheat	cytosol, plastid	48.15	50.32
TraesCS3D01G209500.1	Wheat	cytosol	45.68	49.01
TraesCS5D01G250700.1	Wheat	cytosol	43.83	46.71
TraesCS6D01G282300.1	Wheat	cytosol, mitochondrion	41.98	42.24
TraesCS7D01G379100.1	Wheat	mitochondrion, plastid	41.36	41.61
TraesCS6D01G049600.1	Wheat	cytosol	40.74	41.51
TraesCS6D01G240700.1	Wheat	mitochondrion	31.48	34.0
TraesCS3D01G295000.1	Wheat	cytosol	27.16	29.73
TraesCS4D01G343300.1	Wheat	plastid	33.33	27.69
TraesCS1D01G204100.1	Wheat	cytosol, plastid	32.72	26.9
TraesCS7D01G333800.1	Wheat	cytosol	27.16	25.73

Protein Annotations

EnsemblPlants:TraesCS2D01G168000.1	EnsemblPlantsGene:TraesCS2D01G168000	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF171	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:111351604..111353320

Molecular Weight (calculated)

17649.9 Da

IEP (calculated)

9.938

GRAVY (calculated)

-0.730

Length

162 amino acids

Sequence
(BLAST)

001: MGVGGTLEYL SGLLGGGGGH GHGHGYGNRR RRKQMQTVEL KVSMDCEGCE RKVKNALSSM KGVRSVNINR KQQKVTVAGY VEPSKVLRKA QSTGKKAEIW
101: PYVPYSQVSQ PYVAGTYDKR APAGYVRSQE PGYGNVSGQV SRQDDQLTDM FNDDNANSCA VM

Best Arabidopsis Sequence Match ( AT1G22990.1 )
(BLAST)

001: MGALNYLSEY FSNHFYVSIR KRKKRKVMQT VNIKVKIDCD GCERKIKNAV SSIKGAKSVE VNRKMHKVTV SGYVDPKKVL KTVQSTGKKK AELWPYVPYT
101: MVAYPYAAGA YDKRAPPGFV RKSEQAQAQP GSTDDKLMSL FSDENPNACT VM

Arabidopsis Description

HIPP22HIPP22 [Source:UniProtKB/TrEMBL;Acc:A0A178WF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.