Factsheet for TraesCS3D01G295000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G329600.1	Wheat	cytosol	98.65	98.65
HORVU3Hr1G072940.2	Barley	cytosol	95.27	89.81
Os01t0758000-00	Rice	cytosol	75.0	72.55
Zm00001d043403_P001	Maize	cytosol	72.97	69.68
EES03638	Sorghum	cytosol	75.68	69.57
GSMUA_Achr3P15460_001	Banana	cytosol	57.43	62.04
GSMUA_Achr10P...	Banana	cytosol	49.32	51.77
GSMUA_Achr7P13900_001	Banana	cytosol	50.68	51.02
GSMUA_Achr6P14470_001	Banana	cytosol	47.97	49.31
KRH22286	Soybean	cytosol	47.3	49.3
Solyc07g055010.2.1	Tomato	extracellular	50.0	49.01
KRH27043	Soybean	cytosol	46.62	48.59
AT1G06330.1	Thale cress	cytosol	47.3	46.67
VIT_12s0028g02190.t01	Wine grape	cytosol	44.59	45.21
Bra032428.1-P	Field mustard	cytosol	47.3	44.87
CDY06206	Canola	cytosol	45.27	44.37
PGSC0003DMT400052612	Potato	cytosol, mitochondrion, nucleus	34.46	44.35
TraesCS7D01G333800.1	Wheat	cytosol	46.62	40.35
TraesCS6D01G240700.1	Wheat	mitochondrion	39.19	38.67
TraesCS2D01G063000.1	Wheat	cytosol, plastid	32.43	30.97
TraesCS4D01G102000.1	Wheat	mitochondrion, plastid	30.41	30.41
TraesCS5D01G199500.1	Wheat	cytosol	32.43	30.0
TraesCS7D01G379100.1	Wheat	mitochondrion, plastid	30.41	27.95
TraesCS5D01G250700.1	Wheat	cytosol	28.38	27.63
TraesCS2D01G168000.1	Wheat	cytosol	29.73	27.16
TraesCS2D01G285700.1	Wheat	cytosol	27.7	27.15
TraesCS6D01G049600.1	Wheat	cytosol	29.05	27.04
TraesCS3D01G209500.1	Wheat	cytosol	26.35	25.83
TraesCS6D01G282300.1	Wheat	cytosol, mitochondrion	27.7	25.47
TraesCS4D01G343300.1	Wheat	plastid	32.43	24.62
CDY09978	Canola	cytosol	45.95	23.29
TraesCS1D01G204100.1	Wheat	cytosol, plastid	28.38	21.32

Protein Annotations

EnsemblPlants:TraesCS3D01G295000.1	EnsemblPlantsGene:TraesCS3D01G295000	Gene3D:3.30.70.100	GO:GO:0003674	GO:GO:0005488	GO:GO:0006810
GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
PANTHER:PTHR22814	PANTHER:PTHR22814:SF107	PFAM:PF00403	PFscan:PS50846	SEG:seg	SUPFAM:SSF55008
TIGR:cd00371	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:406412216..406412869

Molecular Weight (calculated)

15985.0 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.330

Length

148 amino acids

Sequence
(BLAST)

001: MTVVEMCVHM CCAGCEKKIR KAVERLEGVD AVEIDMEMQK VTVNGDVDQK KVLKTVRRTG KRAVLWPTPF IAGAGAGGAV NLLAQQHQYH PGGAQMYATH
101: ASGPTSSYNY YKHGYDDSRL YGANSAVVGG TRATDYFSDE NTGGCSVM

Best Arabidopsis Sequence Match ( AT1G06330.1 )
(BLAST)

001: MTTIEMRVHM DCVGCESRVK NALQKMRGVD AVEIDMVQQK VTVTGYADQK KVLKKVRKTG RRAELWQLPY NPDHMGGSSS NGGYFYNPQG CNGPINHAAP
101: VPTSSYNYYK HGYDSNDYSS YRHHPVHASI FSHQTGSKFS DENPNACSIM

Arabidopsis Description

Heavy metal transport/detoxification superfamily protein [Source:TAIR;Acc:AT1G06330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.