Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G077100.1 | Wheat | cytosol, plastid | 100.0 | 100.0 |
| TraesCS2A01G064900.1 | Wheat | nucleus | 98.06 | 98.06 |
| Os04t0244800-01 | Rice | plasma membrane | 90.32 | 90.32 |
| EES11880 | Sorghum | cytosol | 89.68 | 89.68 |
| Zm00001d004138_P001 | Maize | cytosol | 88.39 | 88.39 |
| TraesCS6D01G049600.1 | Wheat | cytosol | 75.48 | 73.58 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 72.9 | 72.9 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 70.97 | 70.97 |
| Bra009662.1-P | Field mustard | cytosol | 52.26 | 66.94 |
| AT4G38580.1 | Thale cress | cytosol | 65.81 | 66.67 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 66.45 | 66.45 |
| PGSC0003DMT400015784 | Potato | cytosol | 65.16 | 66.01 |
| Solyc01g111600.2.1 | Tomato | nucleus | 65.16 | 66.01 |
| TraesCS7D01G379100.1 | Wheat | mitochondrion, plastid | 68.39 | 65.84 |
| KRH60697 | Soybean | cytosol | 65.16 | 65.58 |
| CDY65011 | Canola | cytosol | 64.52 | 65.36 |
| CDX90282 | Canola | cytosol | 64.52 | 65.36 |
| Bra010738.1-P | Field mustard | cytosol | 64.52 | 65.36 |
| Bra033570.1-P | Field mustard | cytosol | 64.52 | 65.36 |
| CDY12089 | Canola | cytosol | 63.87 | 64.71 |
| CDY07874 | Canola | cytosol | 60.0 | 64.14 |
| CDX88005 | Canola | cytosol | 60.0 | 64.14 |
| KRH29001 | Soybean | cytosol | 64.52 | 64.1 |
| CDX72748 | Canola | cytosol | 63.23 | 64.05 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 49.03 | 62.81 |
| AT5G66110.1 | Thale cress | cytosol | 59.35 | 62.59 |
| CDY52653 | Canola | cytosol | 61.29 | 62.09 |
| Bra011581.1-P | Field mustard | cytosol | 61.29 | 62.09 |
| AT4G35060.1 | Thale cress | cytosol | 60.65 | 61.44 |
| CDX69108 | Canola | cytosol | 60.65 | 61.44 |
| PGSC0003DMT400009390 | Potato | cytosol | 61.29 | 59.75 |
| CDX76309 | Canola | cytosol | 59.35 | 59.74 |
| CDY17504 | Canola | cytosol | 59.35 | 59.74 |
| Bra034669.1-P | Field mustard | cytosol | 59.35 | 59.74 |
| Solyc02g083550.1.1 | Tomato | cytosol | 58.71 | 57.23 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 57.42 | 55.62 |
| TraesCS5D01G199500.1 | Wheat | cytosol | 55.48 | 53.75 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 29.68 | 53.49 |
| TraesCS4D01G102000.1 | Wheat | mitochondrion, plastid | 47.1 | 49.32 |
| TraesCS2D01G285700.1 | Wheat | cytosol | 47.1 | 48.34 |
| TraesCS3D01G209500.1 | Wheat | cytosol | 47.1 | 48.34 |
| TraesCS2D01G168000.1 | Wheat | cytosol | 50.32 | 48.15 |
| TraesCS5D01G250700.1 | Wheat | cytosol | 47.1 | 48.03 |
| HORVU2Hr1G011060.1 | Barley | nucleus, plastid | 45.81 | 45.81 |
| KRH28829 | Soybean | cytosol | 34.84 | 44.63 |
| TraesCS6D01G282300.1 | Wheat | cytosol, mitochondrion | 42.58 | 40.99 |
| TraesCS6D01G240700.1 | Wheat | mitochondrion | 32.26 | 33.33 |
| TraesCS3D01G295000.1 | Wheat | cytosol | 30.97 | 32.43 |
| TraesCS7D01G333800.1 | Wheat | cytosol | 30.97 | 28.07 |
| TraesCS4D01G343300.1 | Wheat | plastid | 34.19 | 27.18 |
| TraesCS1D01G204100.1 | Wheat | cytosol, plastid | 29.68 | 23.35 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G063000.1 | EnsemblPlantsGene:TraesCS2D01G063000 | Gene3D:3.30.70.100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0030001 | GO:GO:0046872 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| PANTHER:PTHR22814 | PANTHER:PTHR22814:SF168 | PFAM:PF00403 | PFscan:PS50846 | SUPFAM:SSF55008 | TIGR:cd00371 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:27062401..27063514
Molecular Weight (calculated)
17362.9 Da
IEP (calculated)
9.927
GRAVY (calculated)
-0.522
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVDVVSEY CSLPRSRRHM KRRKQFQTVE MKVRIDCEGC ERKVKKALDD MKGVSSVEVI PKQNKVTVTG YVDPAKVMRR VAYKTGKRVE PWPYVPYDVV
101: AHPYAPGAYD KRAPAGYVRN VMSDPSAAPL ARASSTEARY TAAFSDENPN ACSVM
101: AHPYAPGAYD KRAPAGYVRN VMSDPSAAPL ARASSTEARY TAAFSDENPN ACSVM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.