CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
peroxisome 1
mitochondrion 2
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011581.1-P	Field mustard	cytosol	100.0	100.0
CDX69108	Canola	cytosol	98.04	98.04
AT4G35060.1	Thale cress	cytosol	94.77	94.77
CDY17504	Canola	cytosol	94.77	94.16
CDX76309	Canola	cytosol	94.77	94.16
KRH60697	Soybean	cytosol	75.82	75.32
CDX90282	Canola	cytosol	75.16	75.16
CDY12089	Canola	cytosol	74.51	74.51
CDY65011	Canola	cytosol	73.2	73.2
CDX72748	Canola	cytosol	72.55	72.55
PGSC0003DMT400015784	Potato	cytosol	70.59	70.59
VIT_03s0038g02440.t01	Wine grape	cytosol	71.24	70.32
Solyc01g111600.2.1	Tomato	nucleus	69.93	69.93
KRH29001	Soybean	cytosol	67.97	66.67
GSMUA_Achr4P25770_001	Banana	cytosol, plastid	62.75	61.94
TraesCS2B01G077100.1	Wheat	cytosol, plastid	62.09	61.29
TraesCS2D01G063000.1	Wheat	cytosol, plastid	62.09	61.29
TraesCS2A01G064900.1	Wheat	nucleus	60.78	60.0
GSMUA_Achr1P02370_001	Banana	cytosol, plastid	60.78	60.0
EES11880	Sorghum	cytosol	58.82	58.06
Os04t0244800-01	Rice	plasma membrane	58.17	57.42
CDY07874	Canola	cytosol	54.25	57.24
CDX88005	Canola	cytosol	54.25	57.24
Zm00001d004138_P001	Maize	cytosol	57.52	56.77
KRH24318	Soybean	cytosol, nucleus, plastid	31.37	55.81
Os03t0156600-01	Rice	cytosol	52.94	52.26
TraesCS6A01G043000.1	Wheat	cytosol	54.25	52.2
TraesCS6B01G059000.1	Wheat	cytosol	54.25	52.2
TraesCS6D01G049600.1	Wheat	cytosol	53.59	51.57
EER92834	Sorghum	cytosol	52.29	51.28
HORVU7Hr1G090970.1	Barley	mitochondrion	52.94	50.94
TraesCS7B01G285400.1	Wheat	mitochondrion, plastid	53.59	50.93
Zm00001d027720_P001	Maize	cytosol	51.63	50.64
TraesCS7A01G382700.1	Wheat	mitochondrion, plastid	52.94	50.31
TraesCS7D01G379100.1	Wheat	mitochondrion, plastid	52.29	49.69
CDX72773	Canola	cytosol	47.71	48.67
CDX96299	Canola	cytosol	47.71	48.67
CDY12499	Canola	cytosol	48.37	48.37
CDY25762	Canola	cytosol	47.71	47.71
CDX75144	Canola	cytosol	39.22	47.62
CDY21408	Canola	cytosol	45.75	45.75
TraesCS5D01G250700.1	Wheat	cytosol	45.1	45.39
TraesCS5A01G244000.1	Wheat	cytosol	45.1	45.39
HORVU5Hr1G069380.2	Barley	cytosol	45.1	45.39
CDY04750	Canola	cytosol	45.1	45.1
Zm00001d034978_P001	Maize	cytosol	44.44	45.03
EES14354	Sorghum	cytosol	44.44	45.03
Os01t0507700-01	Rice	plasma membrane	44.44	45.03
TraesCS5B01G242000.1	Wheat	cytosol	44.44	44.74
TraesCS2D01G285700.1	Wheat	cytosol	43.79	44.37
TraesCS2B01G304100.1	Wheat	cytosol	43.79	44.37
TraesCS2A01G287200.1	Wheat	cytosol	43.79	44.37
TraesCS3A01G206100.1	Wheat	cytosol	42.48	43.05
Zm00001d052760_P001	Maize	cytosol	41.83	42.38
TraesCS3D01G209500.1	Wheat	cytosol	41.83	42.38
HORVU3Hr1G049780.1	Barley	cytosol	41.83	42.38
CDY36193	Canola	cytosol	41.18	42.0
CDY42647	Canola	cytosol	41.83	40.51
CDX86196	Canola	cytosol	41.83	40.51
CDY41999	Canola	cytosol	41.83	40.51
TraesCS3B01G238100.1	Wheat	cytosol	26.14	40.0
CDY55938	Canola	cytosol	37.91	38.93
CDX85452	Canola	cytosol	37.91	38.93
CDY38431	Canola	cytosol	37.25	38.26
CDY16919	Canola	cytosol	36.6	37.58
HORVU6Hr1G009000.1	Barley	cytosol, plastid, vacuole	52.94	36.0
CDY57455	Canola	cytosol	30.72	33.33
CDY08096	Canola	cytosol	30.07	33.33
CDY05886	Canola	cytosol	30.07	33.33
CDX94648	Canola	cytosol	30.72	33.33
CDY27183	Canola	cytosol	31.37	30.38
CDX76017	Canola	cytosol	30.72	29.75
CDX72102	Canola	cytosol	30.72	29.75
CDY47384	Canola	cytosol, extracellular	30.72	29.56
CDY06206	Canola	cytosol	28.1	28.48
HORVU2Hr1G011060.1	Barley	nucleus, plastid	27.45	27.1
CDX86861	Canola	plastid	31.37	26.37
CDX99542	Canola	plastid	31.37	26.37
CDX67533	Canola	cytosol	27.45	23.6
CDY13354	Canola	cytosol	27.45	23.6
CDX85985	Canola	mitochondrion	15.69	20.0
CDY09978	Canola	cytosol	28.76	15.07

Protein Annotations

EnsemblPlants:CDY52653	EnsemblPlantsGene:GSBRNA2T00007457001	Gene3D:3.30.70.100	GO:A0A078IUG4	GO:GO:0003674	GO:GO:0005488
GO:GO:0006810	GO:GO:0008150	GO:GO:0030001	GO:GO:0046872	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:IPR006121	PANTHER:PTHR22814	PANTHER:PTHR22814:SF155	PFAM:PF00403	PFscan:PS50846	ProteinID:CDY52653
ProteinID:CDY52653.1	SUPFAM:SSF55008	UniParc:UPI0002547144	UniProt:A0A078IUG4	MapMan:35.1	:

Description

BnaAnng11680DBnaAnng11680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUG4]

Coordinates

chrLK033111:+:68430..69183

Molecular Weight (calculated)

17154.3 Da

IEP (calculated)

7.963

GRAVY (calculated)

-0.418

Length

153 amino acids

Sequence
(BLAST)

001: MGVLDHVSEY FDCSNGDSKR HRSLQTVDVR VLIDCEGCER KVRRALEGMK GVRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PYVPYDVVAH
101: PYASGVYDNR APVGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASGC VVM

Best Arabidopsis Sequence Match ( AT4G35060.1 )
(BLAST)

001: MGVLDHVSEY FDCSHGSSKR HKSLQTVDVR VLIDCEGCER KVRRALEGMR GIRDVTIEPN AQKVTVVGYV EPNKVVARII HRTGKRAELY PFVPYDVVAH
101: PYASGVYDNR APTGYVRNTE YDPHVSRLAR ASSTEVRYTT AFSDENASAC VVM

Arabidopsis Description

HIPP25HIPP25 [Source:UniProtKB/TrEMBL;Acc:A0A178V323]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.