Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0565000-01 | |
| Os04t0445600-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66110.1 | Os02t0565000-01 | AT1G54060.1 | 21798944 |
| AT5G66110.1 | Os04t0445600-00 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92834 | Sorghum | cytosol | 76.77 | 76.28 |
| Zm00001d027720_P001 | Maize | cytosol | 74.19 | 73.72 |
| Bra009662.1-P | Field mustard | cytosol | 55.48 | 71.07 |
| AT5G66110.1 | Thale cress | cytosol | 65.16 | 68.71 |
| GSMUA_Achr4P25770_001 | Banana | cytosol, plastid | 67.1 | 67.1 |
| GSMUA_Achr1P02370_001 | Banana | cytosol, plastid | 67.1 | 67.1 |
| CDX88005 | Canola | cytosol | 61.29 | 65.52 |
| CDY07874 | Canola | cytosol | 61.29 | 65.52 |
| Os04t0244800-01 | Rice | plasma membrane | 65.16 | 65.16 |
| KRH60697 | Soybean | cytosol | 63.87 | 64.29 |
| KRH29001 | Soybean | cytosol | 62.58 | 62.18 |
| VIT_04s0023g03910.t01 | Wine grape | cytosol | 47.1 | 60.33 |
| Bra010738.1-P | Field mustard | cytosol | 59.35 | 60.13 |
| CDX90282 | Canola | cytosol | 59.35 | 60.13 |
| VIT_03s0038g02440.t01 | Wine grape | cytosol | 60.0 | 60.0 |
| Solyc01g111600.2.1 | Tomato | nucleus | 58.71 | 59.48 |
| PGSC0003DMT400015784 | Potato | cytosol | 58.71 | 59.48 |
| AT4G38580.1 | Thale cress | cytosol | 58.71 | 59.48 |
| CDY12089 | Canola | cytosol | 58.71 | 59.48 |
| CDY65011 | Canola | cytosol | 58.06 | 58.82 |
| Bra033570.1-P | Field mustard | cytosol | 58.06 | 58.82 |
| CDX72748 | Canola | cytosol | 57.42 | 58.17 |
| KRH24318 | Soybean | cytosol, nucleus, plastid | 30.32 | 54.65 |
| VIT_04s0023g03890.t01 | Wine grape | cytosol | 55.48 | 53.75 |
| CDY52653 | Canola | cytosol | 52.26 | 52.94 |
| Bra011581.1-P | Field mustard | cytosol | 52.26 | 52.94 |
| PGSC0003DMT400009390 | Potato | cytosol | 54.19 | 52.83 |
| CDY17504 | Canola | cytosol | 52.26 | 52.6 |
| CDX76309 | Canola | cytosol | 52.26 | 52.6 |
| Bra034669.1-P | Field mustard | cytosol | 52.26 | 52.6 |
| CDX69108 | Canola | cytosol | 51.61 | 52.29 |
| AT4G35060.1 | Thale cress | cytosol | 50.97 | 51.63 |
| Solyc02g083550.1.1 | Tomato | cytosol | 52.9 | 51.57 |
| Os08t0403300-00 | Rice | cytosol | 47.74 | 49.33 |
| Os01t0507700-01 | Rice | plasma membrane | 45.81 | 47.02 |
| Os09t0364800-01 | Rice | cytosol, nucleus | 33.55 | 46.43 |
| KRH28829 | Soybean | cytosol | 34.84 | 44.63 |
| Os03t0383900-01 | Rice | cytosol | 43.87 | 43.31 |
| Os01t0758000-00 | Rice | cytosol | 32.26 | 32.68 |
| Os03t0120400-01 | Rice | plastid | 32.9 | 26.42 |
| Os06t0542300-01 | Rice | cytosol | 30.97 | 26.23 |
| Os10t0537400-00 | Rice | cytosol | 30.97 | 25.95 |
Protein Annotations
| Gene3D:3.30.70.100 | MapMan:35.1 | EntrezGene:4331670 | ProteinID:AAM51837.1 | ProteinID:ABF94059.1 | EMBL:AK105367 |
| ProteinID:BAF10924.1 | ProteinID:BAS82367.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0046914 | GO:GO:0046916 | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:IPR006121 | EnsemblPlantsGene:Os03g0156600 | EnsemblPlants:Os03t0156600-01 | PFAM:PF00403 | PFscan:PS50846 | PANTHER:PTHR22814 |
| PANTHER:PTHR22814:SF168 | UniProt:Q8LMQ0 | SUPFAM:SSF55008 | UniParc:UPI00000AB455 | RefSeq:XP_015633091.1 | SEG:seg |
Description
Similar to Farnesylated protein (ATFP6). (Os03t0156600-01)
Coordinates
chr3:-:3046791..3047782
Molecular Weight (calculated)
17225.7 Da
IEP (calculated)
8.441
GRAVY (calculated)
-0.566
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDDIIAEL RVLPAKILLK KKPKQFQKVE VKVRMDCEGC ERKVRKAVEE MKGVSSVEVD AKQNKVTVTG YVEQEEVVGR LRRRAGKKAE PWPYVPYDVV
101: PHPYAPGAYD KKAPPGYVRN ALADPDAAPL ARATEEEEKL ASAFSDENPN SCAVM
101: PHPYAPGAYD KKAPPGYVRN ALADPDAAPL ARATEEEEKL ASAFSDENPN SCAVM
001: MGFRDICYRK HHKKLKQFQK VEIKVKMDCE GCERRVRKSV EGMKGVSKVT VDPKQSKLTV EGFVQPSKVV HRVMHRTGKK AELWPYVPYE VVPHPYAPGA
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
101: YDKKAPPGYV RNALADPLVA PLARASSFEV KYTSAFSDDN PNACTIM
Arabidopsis Description
HIPP27Heavy metal-associated isoprenylated plant protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZW1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.