Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 68.02 | 77.03 |
| TraesCS6B01G230000.1 | Wheat | nucleus | 74.7 | 75.24 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 74.22 | 74.76 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 73.75 | 73.92 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 66.83 | 69.65 |
| KXG30464 | Sorghum | nucleus, plastid | 68.5 | 68.01 |
| Os04t0445600-00 | Rice | nucleus | 57.52 | 57.79 |
| Zm00001d010753_P001 | Maize | nucleus | 45.11 | 57.62 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 31.03 | 38.12 |
| KRH06239 | Soybean | nucleus | 32.7 | 37.03 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 31.98 | 36.81 |
| CDY33246 | Canola | nucleus | 26.73 | 36.6 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 31.5 | 36.46 |
| KRH47662 | Soybean | nucleus, plastid | 31.98 | 36.41 |
| CDY39099 | Canola | nucleus | 27.45 | 36.28 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 26.25 | 35.48 |
| CDY39101 | Canola | nucleus, plastid | 25.78 | 35.41 |
| CDY61477 | Canola | nucleus, plastid | 25.3 | 35.22 |
| Bra021536.1-P | Field mustard | nucleus | 25.54 | 34.97 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 24.82 | 34.55 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 33.17 | 34.41 |
| Solyc03g122030.1.1 | Tomato | nucleus | 29.59 | 34.16 |
| CDY02487 | Canola | nucleus, plastid | 25.06 | 34.09 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 29.59 | 33.24 |
| CDX75751 | Canola | nucleus | 29.36 | 33.06 |
| CDY08216 | Canola | nucleus | 25.3 | 32.32 |
| Bra014370.1-P | Field mustard | nucleus | 25.54 | 31.94 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 49.64 | 31.33 |
| Os01t0674000-01 | Rice | nucleus | 23.63 | 29.82 |
| AT3G14180.1 | Thale cress | nucleus | 31.26 | 29.57 |
| CDY26148 | Canola | nucleus, plastid | 25.06 | 29.41 |
| AT1G54060.1 | Thale cress | nucleus | 25.78 | 28.2 |
| Os05t0560600-01 | Rice | nucleus | 23.15 | 28.03 |
| CDY51405 | Canola | nucleus | 7.64 | 25.2 |
| Os01t0718900-01 | Rice | nucleus | 19.09 | 24.84 |
| CDY33093 | Canola | cytosol, plastid | 24.82 | 23.8 |
| Bra030909.1-P | Field mustard | nucleus | 7.16 | 23.44 |
Protein Annotations
| EnsemblPlants:Os02t0565000-01 | EnsemblPlantsGene:Os02g0565000 | EntrezGene:4329700 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 |
| PFAM:PF13837 | ProteinID:BAD15822.1 | ProteinID:BAF09077.1 | ProteinID:BAS79293.1 | ProteinID:EAZ23480.1 | RefSeq:XP_015623080.1 |
| SEG:seg | UniParc:UPI0000358B97 | UniProt:Q6Z7E6 | MapMan:15.5.20 | : | : |
Description
Homeodomain-like containing protein. (Os02t0565000-01)
Coordinates
chr2:-:21449650..21451339
Molecular Weight (calculated)
44441.0 Da
IEP (calculated)
6.525
GRAVY (calculated)
-0.786
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDGGASPS SSLSPSRSPS PLPVADPVTV AAAPPGHLAL AIPIPKPGSS SGGGGGGGGR EDAWSDGATS TLIDAWGERF VALGRGSLRH PQWQEVAEVV
101: SSRDGYSKQP KSDVQCKNRI DTLKKKYKVE KAKPDSSWPY FHRLDTLLAP VHKPAGAYPA AAAAGAAGAG NSGSNSAAAA TAARSTAPMA PRVNFPQRTR
201: TQFLPSSGVK RRMPSPPQVS ASSESSDGFP PEPPMAAANG KRRREVEEEV NGADSGHRTQ GLRELAQAIR RFGEVYERVE LAKREQELRM ERDRLEAARE
301: LEDQRVQFFL KMQMELSKAN NAGASAAAAA VGAVATAIAA ADGNGTRRTA MATDVGTSSN HHVRYRFQDS RHCHAAPQQP QHQYNENNAA EAARGTGNGS
401: DTDNKEDEDE AEDEEDESQ
101: SSRDGYSKQP KSDVQCKNRI DTLKKKYKVE KAKPDSSWPY FHRLDTLLAP VHKPAGAYPA AAAAGAAGAG NSGSNSAAAA TAARSTAPMA PRVNFPQRTR
201: TQFLPSSGVK RRMPSPPQVS ASSESSDGFP PEPPMAAANG KRRREVEEEV NGADSGHRTQ GLRELAQAIR RFGEVYERVE LAKREQELRM ERDRLEAARE
301: LEDQRVQFFL KMQMELSKAN NAGASAAAAA VGAVATAIAA ADGNGTRRTA MATDVGTSSN HHVRYRFQDS RHCHAAPQQP QHQYNENNAA EAARGTGNGS
401: DTDNKEDEDE AEDEEDESQ
001: MEDDEDIRSQ GSDSPDPSSS PPAGRITVTV ASAGPPSYSL TPPGNSSQKD PDALALALLP IQASGGGNNS SGRPTGGGGR EDCWSEAATA VLIDAWGERY
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
101: LELSRGNLKQ KHWKEVAEIV SSREDYGKIP KTDIQCKNRI DTVKKKYKQE KVRIANGGGR SRWVFFDKLD RLIGSTAKIP TATSGVSGPV GGLHKIPMGI
201: PMGSRSNLYH QQAKAATPPF NNLDRLIGAT ARVSAASFGG SGGGGGGGSV NVPMGIPMSS RSAPFGQQGR TLPQQGRTLP QQQQQGMMVK RCSESKRWRF
301: RKRNASDSDS ESEAAMSDDS GDSLPPPPLS KRMKTEEKKK QDGDGVGNKW RELTRAIMRF GEAYEQTENA KLQQVVEMEK ERMKFLKELE LQRMQFFVKT
401: QLEISQLKQQ HGRRMGNTSN DHHHSRKNNI NAIVNNNNDL GNN
Arabidopsis Description
ASIL2ASIL2 [Source:UniProtKB/TrEMBL;Acc:A0A178V8Z7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.