Factsheet for Bra037960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000622.1-P
Bra001302.1-P
Bra003473.1-P
Bra004190.1-P
Bra005022.1-P
Bra005553.1-P
Bra005749.1-P
Bra008624.1-P
Bra009560.1-P
Bra010051.1-P
Bra011329.1-P
Bra011460.1-P
Bra012670.1-P
Bra013976.1-P
Bra014187.1-P
Bra014421.1-P
Bra015090.1-P
Bra017058.1-P
Bra018237.1-P
Bra023619.1-P
Bra025379.1-P
Bra025492.1-P
Bra026241.1-P
Bra027911.1-P
Bra029780.1-P
Bra033088.1-P
Bra034075.1-P
Bra037927.1-P
Bra038147.1-P
Bra039964.1-P
Bra040630.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54060.1	Bra014187.1-P	AT1G49410.1	21798944
AT1G54060.1	Bra027911.1-P	AT1G57620.1	21798944
AT1G54060.1	Bra038147.1-P	AT1G57620.1	21798944
AT1G54060.1	Bra004190.1-P	AT1G66820.1	21798944
AT1G54060.1	Bra040630.1-P	AT1G66820.1	21798944
AT1G54060.1	Bra039964.1-P	AT2G29125.1	21798944
AT1G54060.1	Bra018237.1-P	AT2G31490.1	21798944
AT1G54060.1	Bra005553.1-P	AT2G32840.1	21798944
AT1G54060.1	Bra005022.1-P	AT2G39705.1	21798944
AT1G54060.1	Bra017058.1-P	AT2G39705.1	21798944
AT1G54060.1	Bra001302.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra029780.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra034075.1-P	AT3G09630.1	21798944
AT1G54060.1	Bra015090.1-P	AT3G24860.1	21798944
AT1G54060.1	Bra025379.1-P	AT3G29160.1	21798944
AT1G54060.1	Bra033088.1-P	AT3G29160.1	21798944
AT1G54060.1	Bra003473.1-P	AT3G61790.1	21798944
AT1G54060.1	Bra014421.1-P	AT3G61790.1	21798944
AT1G54060.1	Bra012670.1-P	AT4G17270.1	21798944
AT1G54060.1	Bra026241.1-P	AT4G17270.1	21798944
AT1G54060.1	Bra011329.1-P	AT4G32260.1	21798944
AT1G54060.1	Bra011460.1-P	AT4G33666.1	21798944
AT1G54060.1	Bra005749.1-P	AT5G02870.1	21798944
AT1G54060.1	Bra009560.1-P	AT5G02870.1	21798944
AT1G54060.1	Bra008624.1-P	AT5G16320.1	21798944
AT1G54060.1	Bra013976.1-P	AT5G17450.1	21798944
AT1G54060.1	Bra023619.1-P	AT5G17450.1	21798944
AT1G54060.1	Bra025492.1-P	AT5G41520.1	21798944
AT1G54060.1	Bra037927.1-P	AT5G50335.1	21798944
AT1G54060.1	Bra000622.1-P	AT5G60160.1	21798944
AT1G54060.1	Bra010051.1-P	AT5G62030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51405	Canola	nucleus	41.86	99.21
Bra030909.1-P	Field mustard	nucleus	35.88	84.38
Bra014370.1-P	Field mustard	nucleus	81.4	73.13
AT1G54060.1	Thale cress	nucleus	79.73	62.66
Bra021534.1-P	Field mustard	nucleus, plastid	39.87	38.71
Bra021536.1-P	Field mustard	nucleus	37.21	36.6
Solyc03g122030.1.1	Tomato	nucleus	43.85	36.36
VIT_09s0002g00720.t01	Wine grape	nucleus	43.19	35.71
KRH06239	Soybean	nucleus	43.52	35.41
KRH47662	Soybean	nucleus, plastid	43.19	35.33
Bra034866.1-P	Field mustard	nucleus	30.56	35.25
PGSC0003DMT400088401	Potato	nucleus, plastid	43.52	35.12
Bra034165.1-P	Field mustard	nucleus	31.89	34.78
Bra009119.1-P	Field mustard	nucleus	27.24	32.67
Bra007407.1-P	Field mustard	nucleus, plastid	29.9	30.72
GSMUA_Achr9P14340_001	Banana	nucleus	35.88	29.83
GSMUA_Achr8P23650_001	Banana	nucleus	33.55	29.62
Bra003346.1-P	Field mustard	nucleus	29.24	28.76
TraesCS6A01G198600.1	Wheat	nucleus, plastid	33.55	27.3
GSMUA_Achr3P05880_001	Banana	nucleus	34.55	25.74
TraesCS6B01G230000.1	Wheat	nucleus	35.22	25.48
Zm00001d003549_P001	Maize	nucleus	32.56	25.45
Os04t0445600-00	Rice	nucleus	35.22	25.42
HORVU6Hr1G050140.1	Barley	nucleus, plastid	35.22	25.36
Zm00001d025514_P001	Maize	nucleus	32.56	25.0
Zm00001d016876_P001	Maize	nucleus, plastid	33.22	24.88
Os02t0565000-01	Rice	nucleus	34.55	24.82
TraesCS6D01G184500.2	Wheat	nucleus	34.22	24.76
EES12241	Sorghum	nucleus	33.55	24.75
TraesCS2D01G311800.1	Wheat	nucleus, plastid	33.22	24.21
TraesCS2A01G313300.1	Wheat	nucleus, plastid	33.22	24.04
TraesCS2B01G332100.1	Wheat	nucleus, plastid	33.22	24.04
KXG30464	Sorghum	nucleus, plastid	31.89	22.75
Zm00001d010753_P001	Maize	nucleus	24.25	22.26
Bra001951.1-P	Field mustard	nucleus	22.59	20.06
HORVU2Hr1G077940.1	Barley	cytosol, nucleus, plastid	10.96	14.73
Zm00001d042917_P001	Maize	golgi, plasma membrane	25.58	11.6

Protein Annotations

EnsemblPlants:Bra037960.1	EnsemblPlants:Bra037960.1-P	EnsemblPlantsGene:Bra037960	ncoils:Coil	PANTHER:PTHR31307	PFAM:PF13837
SEG:seg	UniParc:UPI000253E710	UniProt:M4FA46	MapMan:15.5.20	:	:

Description

AT1G54060 (E=2e-042) ASIL1 | ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor

Coordinates

chrA06:-:407363..408268

Molecular Weight (calculated)

33274.1 Da

IEP (calculated)

8.452

GRAVY (calculated)

-0.990

Length

301 amino acids

Sequence
(BLAST)

001: MMEEEDETPS QQSPRDSLSP APILPTSNVT VASATKPPPS SSSQSPLALV VQTPSVNRNG RIGGGGGGGR DDCWSEEATK VLINAWGDRF SEPGKGTLKQ
101: QQWHEVAEIV NSSGQCKYAK TDVQCKNRID TVKKKYKQEK AKNGPSKWAF FKKLESLIGG GGKAHVGGRS SGPMRWHFRK RSASESESES EPERSAESLP
201: PPQPLLPKRV KMGESGVGDV AKAILGFTEA YEKAETAKLK LMMELEKERM KFAKEMELQR MQFLKTQMEI TRNNQEEERS KRDGDDDDDD RNVKNNGDVS
301: S

Best Arabidopsis Sequence Match ( AT1G54060.1 )
(BLAST)

001: MEDDDEIQSI PSPGDSSLSP QAPPSPPILP TNDVTVAVVK KPQPGLSSQS PSMNALALVV HTPSVTGGGG SGNRNGRGGG GGSGGGGGGR DDCWSEEATK
101: VLIEAWGDRF SEPGKGTLKQ QHWKEVAEIV NKSRQCKYPK TDIQCKNRID TVKKKYKQEK AKIASGDGPS KWVFFKKLES LIGGTTTFIA SSKASEKAPM
201: GGALGNSRSS MFKRQTKGNQ IVQQQQEKRG SDSMRWHFRK RSASETESES DPEPEASPEE SAESLPPLQP IQPLSFHMPK RLKVDKSGGG GSGVGDVARA
301: ILGFTEAYEK AETAKLKLMA ELEKERMKFA KEMELQRMQF LKTQLEITQN NQEEEERSRQ RGERRIVDDD DDRNGKNNGN VSS

Arabidopsis Description

ASIL1Trihelix transcription factor ASIL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.