Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G198600.1 | Wheat | nucleus, plastid | 85.58 | 96.22 |
| TraesCS6D01G184500.2 | Wheat | nucleus | 95.91 | 95.91 |
| HORVU6Hr1G050140.1 | Barley | nucleus, plastid | 91.59 | 91.15 |
| Os02t0565000-01 | Rice | nucleus | 75.24 | 74.7 |
| Zm00001d016876_P001 | Maize | nucleus, plastid | 65.14 | 67.41 |
| KXG30464 | Sorghum | nucleus, plastid | 66.35 | 65.4 |
| TraesCS2B01G332100.1 | Wheat | nucleus, plastid | 58.89 | 58.89 |
| Zm00001d010753_P001 | Maize | nucleus | 43.03 | 54.57 |
| GSMUA_Achr8P23650_001 | Banana | nucleus | 30.53 | 37.24 |
| VIT_09s0002g00720.t01 | Wine grape | nucleus | 32.45 | 37.09 |
| KRH06239 | Soybean | nucleus | 31.97 | 35.95 |
| GSMUA_Achr9P14340_001 | Banana | nucleus | 31.01 | 35.64 |
| CDY33246 | Canola | nucleus | 26.2 | 35.62 |
| KRH47662 | Soybean | nucleus, plastid | 31.49 | 35.6 |
| Bra037960.1-P | Field mustard | nucleus, plastid | 25.48 | 35.22 |
| CDY61477 | Canola | nucleus, plastid | 25.24 | 34.88 |
| CDY02487 | Canola | nucleus, plastid | 25.72 | 34.74 |
| CDY39099 | Canola | nucleus | 26.2 | 34.38 |
| Bra021534.1-P | Field mustard | nucleus, plastid | 25.24 | 33.87 |
| GSMUA_Achr3P05880_001 | Banana | nucleus | 32.21 | 33.17 |
| CDY39101 | Canola | nucleus, plastid | 24.28 | 33.11 |
| Solyc03g122030.1.1 | Tomato | nucleus | 28.61 | 32.78 |
| Bra021536.1-P | Field mustard | nucleus | 24.04 | 32.68 |
| Bra014370.1-P | Field mustard | nucleus | 26.2 | 32.54 |
| CDX75751 | Canola | nucleus | 29.09 | 32.53 |
| PGSC0003DMT400088401 | Potato | nucleus, plastid | 29.09 | 32.44 |
| CDY08216 | Canola | nucleus | 25.48 | 32.32 |
| TraesCS3B01G305100.1 | Wheat | nucleus | 23.56 | 30.72 |
| Zm00001d042917_P001 | Maize | golgi, plasma membrane | 47.84 | 29.97 |
| CDY26148 | Canola | nucleus, plastid | 25.48 | 29.69 |
| AT3G14180.1 | Thale cress | nucleus | 31.25 | 29.35 |
| AT1G54060.1 | Thale cress | nucleus | 26.92 | 29.24 |
| TraesCS3B01G274700.1 | Wheat | nucleus, plastid | 21.39 | 28.53 |
| TraesCS1B01G420500.1 | Wheat | nucleus | 24.04 | 28.09 |
| CDY51405 | Canola | nucleus | 7.69 | 25.2 |
| CDY33093 | Canola | cytosol, plastid | 25.24 | 24.03 |
| Bra030909.1-P | Field mustard | nucleus | 7.21 | 23.44 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G230000.1 | EnsemblPlantsGene:TraesCS6B01G230000 | ncoils:Coil | PANTHER:PTHR31307 | PANTHER:PTHR31307:SF12 | PFAM:PF13837 |
| SEG:seg | MapMan:15.5.20 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:369526387..369527637
Molecular Weight (calculated)
44443.1 Da
IEP (calculated)
5.853
GRAVY (calculated)
-0.837
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDDGAASPS PSPSPSRSPS SLPIADPVTV AAVPPGHLAL AIPIHKHGPS NGGGGGGGGG REDAWSDGAT STLIDAWGER FVALGRGSLR HPQWQEVAEV
101: VSSRDGYSKP PKSDVQCKNR IDTLKKKYKV EKAKSDSSWP FFDRLDFLLA PVQKLLGNSG GPAGNSGSNP NNRSTAPMAP RVNFPQRTRT AFPSSGMKRR
201: LPSPPQASAS SESSDGFPPE PLAEAVNGKR QRLEESANGA DSSDRAQGLR DLAQAIRRLG ETYERVESSK GEHELRMERN RLDAARELED QRVQFFLKMQ
301: MEISKANNGA PLAVPLAAAA MVGNSASTAE DGDSPATADG NGPRRASMAT DVMASSNHHV RYRVKDDRHH HASQRPSYLY NENNVVAADA GGIGSGSDSS
401: NKEDEEEMED EEEESQ
101: VSSRDGYSKP PKSDVQCKNR IDTLKKKYKV EKAKSDSSWP FFDRLDFLLA PVQKLLGNSG GPAGNSGSNP NNRSTAPMAP RVNFPQRTRT AFPSSGMKRR
201: LPSPPQASAS SESSDGFPPE PLAEAVNGKR QRLEESANGA DSSDRAQGLR DLAQAIRRLG ETYERVESSK GEHELRMERN RLDAARELED QRVQFFLKMQ
301: MEISKANNGA PLAVPLAAAA MVGNSASTAE DGDSPATADG NGPRRASMAT DVMASSNHHV RYRVKDDRHH HASQRPSYLY NENNVVAADA GGIGSGSDSS
401: NKEDEEEMED EEEESQ
001: MDTVNDSFSP GSSRPSPATL SREDCWSEEA TFTLIQAWGN RYVDLSRGNL RQKHWQEVAN AVNDRHYNTG RNVSAAKSQP YRTDVQCKNR IDTLKKKYKV
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
101: EKARVSESNP GAYISPWPFF SALDDLLRES FPTSSNPDST DNIPHQRLSL PMSINPVPVA PRSAIPRRPA TSPAIIPHAG DDLLGFRGNL NAFAAAAAAA
201: ACPASEDDSE GSRSRSSGRS GSNKKRERKI EKKQGYKEVA DAIERLGQIY ERVEEKKRKE MVELEKQRMR FAKELECHRM QLFTEMQVRL HKLRRTSGSK
301: GPTSSASAGE T
Arabidopsis Description
Sequence-specific DNA binding transcription factor [Source:UniProtKB/TrEMBL;Acc:Q8GXR6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.