Factsheet for TraesCS4B01G232900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G095100.1
TraesCS1A01G177600.1
TraesCS1A01G299400.1
TraesCS1A01G425200.2
TraesCS1B01G123100.1
TraesCS1B01G202600.1
TraesCS1B01G309200.1
TraesCS1B01G459600.2
TraesCS1D01G103800.1
TraesCS1D01G176100.1
TraesCS1D01G298300.1
TraesCS1D01G434200.2
TraesCS2A01G106600.1
TraesCS2B01G124200.1
TraesCS2B01G531300.1
TraesCS2D01G107200.1
TraesCS3A01G224200.2
TraesCS3B01G253700.2
TraesCS3D01G229400.1
TraesCS4A01G498700.1
TraesCS5A01G092000.1
TraesCS5A01G092100.1
TraesCS5A01G095100.1
TraesCS5B01G097500.1
TraesCS5B01G097600.1
TraesCS5B01G101300.1
TraesCS5B01G123900.1
TraesCS5D01G104200.1
TraesCS5D01G104300.1
TraesCS5D01G107800.1
TraesCS6A01G089100.2
TraesCS6A01G272000.1
TraesCS6A01G274500.1
TraesCS6A01G316200.1
TraesCS6B01G111500.1
TraesCS6B01G299600.1
TraesCS6B01G302000.1
TraesCS6B01G346700.1
TraesCS6D01G252200.1
TraesCS6D01G254800.1
TraesCS6D01G295500.1
TraesCS7A01G001900.1
TraesCS7A01G177500.1
TraesCS7A01G177600.1
TraesCS7A01G177700.1
TraesCS7A01G177800.1
TraesCS7A01G232500.1
TraesCS7A01G236700.1
TraesCS7A01G304400.1
TraesCS7A01G323000.1
TraesCS7A01G336000.1
TraesCS7A01G351500.1
TraesCS7B01G082900.1
TraesCS7B01G083100.1
TraesCS7B01G083200.2
TraesCS7B01G083300.1
TraesCS7B01G083400.1
TraesCS7B01G083500.1
TraesCS7B01G130900.1
TraesCS7B01G223900.1
TraesCS7B01G247600.1
TraesCS7B01G276600.1
TraesCS7D01G001600.2
TraesCS7D01G178900.1
TraesCS7D01G179000.1
TraesCS7D01G179100.1
TraesCS7D01G179200.1
TraesCS7D01G179300.1
TraesCS7D01G179400.1
TraesCS7D01G179500.1
TraesCS7D01G179600.1
TraesCS7D01G232600.1
TraesCS7D01G299900.1
TraesCS7D01G319600.1
TraesCS7D01G343700.1
TraesCS7D01G371500.1
TraesCSU01G017200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32840.1	TraesCS1A01G095100.1	AT2G47700.1	21798944
AT2G32840.1	TraesCS1B01G123100.1	AT2G47700.1	21798944
AT2G32840.1	TraesCS1D01G103800.1	AT2G47700.1	21798944
AT2G32840.1	TraesCS5A01G092000.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS5A01G092100.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS5B01G097500.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS5B01G097600.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS5D01G104200.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS5D01G104300.1	AT2G47710.1	21798944
AT2G32840.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G32840.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G32840.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT2G32840.1	TraesCS6A01G272000.1	AT3G50910.1	21798944
AT2G32840.1	TraesCS6B01G299600.1	AT3G50910.1	21798944
AT2G32840.1	TraesCS6D01G252200.1	AT3G50910.1	21798944
AT2G32840.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT2G32840.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT2G32840.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT2G32840.1	TraesCS1A01G299400.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS1B01G309200.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS1D01G298300.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS2A01G106600.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS2B01G124200.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS2D01G107200.1	AT3G56270.1	21798944
AT2G32840.1	TraesCS7A01G323000.1	AT4G00120.1	21798944
AT2G32840.1	TraesCS7B01G223900.1	AT4G00120.1	21798944
AT2G32840.1	TraesCS7D01G319600.1	AT4G00120.1	21798944
AT2G32840.1	TraesCS1A01G425200.2	AT4G01090.1	21798944
AT2G32840.1	TraesCS1B01G459600.2	AT4G01090.1	21798944
AT2G32840.1	TraesCS1D01G434200.2	AT4G01090.1	21798944
AT2G32840.1	TraesCS3A01G224200.2	AT4G01090.1	21798944
AT2G32840.1	TraesCS3B01G253700.2	AT4G01090.1	21798944
AT2G32840.1	TraesCS3D01G229400.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7A01G336000.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7A01G351500.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7B01G247600.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7B01G276600.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7D01G343700.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS7D01G371500.1	AT4G01090.1	21798944
AT2G32840.1	TraesCS2B01G531300.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS5B01G123900.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS6A01G316200.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS6B01G346700.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS6D01G295500.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G177500.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G177600.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G177700.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G177800.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G232500.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7A01G236700.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G082900.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G083100.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G083200.2	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G083300.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G083400.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G083500.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7B01G130900.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G178900.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179000.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179100.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179200.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179300.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179400.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179500.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G179600.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS7D01G232600.1	AT4G25200.1	21798944
AT2G32840.1	TraesCS6A01G089100.2	AT4G30330.1	21798944
AT2G32840.1	TraesCS6B01G111500.1	AT4G30330.1	21798944
AT2G32840.1	TraesCS7A01G304400.1	AT4G30330.1	21798944
AT2G32840.1	TraesCS7D01G299900.1	AT4G30330.1	21798944
AT2G32840.1	TraesCSU01G017200.1	AT4G30330.1	21798944
AT2G32840.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT2G32840.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT2G32840.1	TraesCS1D01G176100.1	AT4G39050.1	21798944
AT2G32840.1	TraesCS5A01G095100.1	AT5G11980.1	21798944
AT2G32840.1	TraesCS5B01G101300.1	AT5G11980.1	21798944
AT2G32840.1	TraesCS5D01G107800.1	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G234100.1	Wheat	plastid	93.14	93.63
TraesCS4A01G076800.1	Wheat	plastid	90.5	91.22
HORVU4Hr1G064990.1	Barley	plastid	82.06	79.54
Os03t0234600-00	Rice	plastid	44.33	63.4
EER92590	Sorghum	plastid	48.55	59.55
Zm00001d047985_P002	Maize	plastid	48.28	50.14
GSMUA_Achr7P11350_001	Banana	endoplasmic reticulum, extracellular	19.79	43.35
GSMUA_Achr6P06320_001	Banana	nucleus	11.08	39.25
VIT_13s0156g00270.t01	Wine grape	cytosol	11.08	33.07
KRH13875	Soybean	cytosol, nucleus, plastid	23.48	30.9
KRH43426	Soybean	cytosol	21.9	30.63
CDY12159	Canola	nucleus, plastid	21.64	27.61
Bra005553.1-P	Field mustard	nucleus, plastid	21.37	27.09
CDY52552	Canola	nucleus, plastid	20.05	25.85
Solyc01g073920.2.1	Tomato	cytosol, plastid	22.16	24.56
CDX89775	Canola	plastid	21.64	24.26
CDY18271	Canola	plastid	19.0	24.24
Bra015366.1-P	Field mustard	nucleus, plastid	21.37	23.96
AT2G32840.1	Thale cress	nucleus, plastid	20.58	23.15
AT1G04930.2	Thale cress	nucleus, plastid	20.84	21.82
PGSC0003DMT400016192	Potato	nucleus, plastid	12.14	16.08

Protein Annotations

EnsemblPlants:TraesCS4B01G232900.1	EnsemblPlantsGene:TraesCS4B01G232900	GO:GO:0005575	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0017053	InterPro:LIN37	PANTHER:PTHR37173	PFAM:PF15306	SEG:seg	MapMan:35.2

Description

No Description!

Coordinates

chr4B:+:484094941..484103961

Molecular Weight (calculated)

40472.9 Da

IEP (calculated)

10.468

GRAVY (calculated)

-0.494

Length

379 amino acids

Sequence
(BLAST)

001: MSSPPPQRPP TTTTALPPTA TPPPPATASQ PLPRAFLATY TAPQRAANST PTPPLLFTGR PLNPNPSHTS PAHGILYPVA ASSSTPAAAA AAAANHRRAP
101: PTGVAYPRAH AVAVPVTAPS QQPQVPTQQR SYAAVPRAVV AGVTPRPEHP PRGVPIAPHP QLKVNAVPAV TPSLAVTPSL AVTPSPAVTP SLVVTPSPAV
201: TPSPAFTPFP REHVTTKERE STKENASTVV INDRKVNVLD SESGSLYALC RSWLRNGVPH EIQPSFAGNV APLLPRPLPA SVVDSRMSEK DNDVEDQVSE
301: EEQRHAQERN TLCTRDAMDR ALTNNDTSEY TASDLLREHV TRAKNIRAKL RKERQVRIER YKQRLALLLP PPPPPPSEP

Best Arabidopsis Sequence Match ( AT2G32840.1 )
(BLAST)

001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE

Arabidopsis Description

Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.