Factsheet for TraesCS5B01G097600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G242200.1
TraesCS1B01G253700.1
TraesCS1D01G242100.1
TraesCS5A01G092000.1
TraesCS5A01G092100.1
TraesCS5A01G151500.2
TraesCS5A01G389400.2
TraesCS5A01G389500.1
TraesCS5A01G389700.1
TraesCS5B01G097500.1
TraesCS5B01G097600.1
TraesCS5B01G150100.1
TraesCS5B01G394600.1
TraesCS5B01G394700.1
TraesCS5D01G104200.1
TraesCS5D01G104300.1
TraesCS5D01G156700.1
TraesCS5D01G399400.2
TraesCS5D01G399500.1
TraesCS5D01G399600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	TraesCS1A01G242200.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS1B01G253700.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS1D01G242100.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS5A01G092000.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5A01G092100.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5B01G097500.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5B01G097600.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5D01G104200.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5D01G104300.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5A01G151500.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389400.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389500.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G150100.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G394600.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G394700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G156700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399400.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399500.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399600.1	AT3G58450.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G104200.1	Wheat	cytosol	98.22	98.22
TraesCS5A01G092000.1	Wheat	cytosol	98.22	96.51
HORVU5Hr1G024160.3	Barley	cytosol	95.86	92.57
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	84.62	84.62
Zm00001d023830_P001	Maize	cytosol, extracellular, mitochondrion	82.84	81.87
EES17172	Sorghum	cytosol	85.21	81.82
CDY27474	Canola	cytosol	28.99	76.56
GSMUA_Achr5P00180_001	Banana	cytosol	69.23	75.97
GSMUA_Achr6P20400_001	Banana	cytosol	66.86	73.38
GSMUA_Achr8P06640_001	Banana	cytosol	63.91	67.5
Bra000458.1-P	Field mustard	cytosol	62.72	65.43
CDX95730	Canola	cytosol	62.72	65.43
CDX83322	Canola	cytosol	62.72	65.43
PGSC0003DMT400061758	Potato	cytosol	60.35	64.97
CDY53014	Canola	cytosol	62.13	64.81
Bra004435.1-P	Field mustard	cytosol	62.13	64.81
CDX80128	Canola	cytosol	62.13	64.81
Solyc06g084540.2.1	Tomato	cytosol	59.17	63.69
AT2G47710.1	Thale cress	cytosol	60.95	63.58
KRG96437	Soybean	cytosol	60.35	62.58
KRH71566	Soybean	cytosol	57.99	62.03
CDY55534	Canola	cytosol	59.17	61.73
Bra021440.1-P	Field mustard	cytosol	59.17	61.73
TraesCS5B01G097500.1	Wheat	cytosol	72.78	61.19
KRH31878	Soybean	cytosol	57.4	59.15
PGSC0003DMT400037920	Potato	cytosol	55.03	57.76
Solyc06g009050.2.1	Tomato	cytosol, nucleus	55.03	57.76
TraesCS2B01G131200.1	Wheat	cytosol	55.03	51.67
TraesCS2B01G131300.1	Wheat	cytosol	52.07	50.87
TraesCS2B01G130500.1	Wheat	cytosol	50.89	50.29
TraesCS2B01G131400.1	Wheat	cytosol	49.11	37.9
TraesCS2B01G530300.1	Wheat	cytosol, plastid	33.73	34.76
TraesCS6B01G344000.1	Wheat	cytosol	32.54	33.95
VIT_07s0005g00290.t01	Wine grape	cytosol	66.86	33.53
TraesCS5B01G150100.1	Wheat	cytosol	36.69	32.8
TraesCS4B01G185100.1	Wheat	cytosol	31.36	30.99
TraesCS5B01G394600.1	Wheat	cytosol	38.46	29.82
TraesCS5B01G394700.1	Wheat	cytosol	32.54	29.73
TraesCS6B01G301700.1	Wheat	cytosol	20.71	19.77
TraesCS6B01G312700.1	Wheat	cytosol	20.71	19.77

Protein Annotations

EnsemblPlants:TraesCS5B01G097600.1	EnsemblPlantsGene:TraesCS5B01G097600	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF118	PFAM:PF00582
PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:

Description

No Description!

Coordinates

chr5B:-:128854525..128855822

Molecular Weight (calculated)

18083.7 Da

IEP (calculated)

7.061

GRAVY (calculated)

0.008

Length

169 amino acids

Sequence
(BLAST)

001: MAEETGATAA SGSAAGKMTM VVGVDESEHS YYALQWTLLH FFSPGQQQQY RLVVVTAKPT AASAVGLAGP GAAEVLPFVE ADLKRSSLRV IDKAKELCAQ
101: VSDAVFEVVE GDARNVLCEA VERHHAEMLV VGNHGYGAIK RAVLGSVSDY CTHHAHCTVM IVKKPKHKH

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.