Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G389400.2 | Wheat | cytosol | 88.41 | 87.98 |
| HORVU5Hr1G095180.3 | Barley | cytosol | 74.88 | 83.78 |
| TraesCS5D01G399500.1 | Wheat | cytosol | 79.71 | 80.88 |
| TraesCS5D01G399600.1 | Wheat | cytosol | 71.5 | 79.57 |
| TraesCS5B01G394600.1 | Wheat | cytosol | 82.13 | 77.98 |
| Zm00001d034027_P001 | Maize | cytosol | 57.97 | 64.52 |
| CDX73846 | Canola | cytosol | 21.74 | 63.38 |
| CDY53924 | Canola | cytosol | 21.74 | 63.38 |
| EER93447 | Sorghum | cytosol | 56.52 | 60.62 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 44.44 | 49.46 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 29.95 | 48.06 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 41.55 | 45.03 |
| Solyc01g057000.2.1 | Tomato | cytosol | 35.27 | 42.44 |
| CDY01070 | Canola | cytosol | 33.33 | 42.07 |
| PGSC0003DMT400084231 | Potato | cytosol | 35.27 | 40.78 |
| Bra038688.1-P | Field mustard | cytosol | 38.16 | 39.5 |
| CDY47907 | Canola | cytosol | 37.68 | 39.0 |
| CDY08481 | Canola | cytosol | 37.68 | 39.0 |
| Bra001427.1-P | Field mustard | cytosol | 37.2 | 38.89 |
| CDY08484 | Canola | cytosol | 37.2 | 38.5 |
| Bra034800.1-P | Field mustard | cytosol | 37.2 | 38.5 |
| KRH71765 | Soybean | endoplasmic reticulum | 34.78 | 37.7 |
| TraesCS2D01G113000.1 | Wheat | cytosol | 31.4 | 36.72 |
| AT3G11930.3 | Thale cress | cytosol | 39.61 | 36.28 |
| TraesCS5D01G104200.1 | Wheat | cytosol | 29.47 | 36.09 |
| AT3G58450.1 | Thale cress | cytosol | 35.27 | 35.78 |
| TraesCS2D01G112900.1 | Wheat | cytosol | 30.92 | 35.56 |
| TraesCS6D01G293300.1 | Wheat | cytosol | 27.54 | 35.19 |
| TraesCS5D01G156700.1 | Wheat | cytosol | 32.37 | 35.08 |
| Bra007393.1-P | Field mustard | cytosol | 31.88 | 34.74 |
| CDY06041 | Canola | cytosol | 31.88 | 34.74 |
| TraesCS2D01G112300.1 | Wheat | cytosol | 28.99 | 34.68 |
| CDX71957 | Canola | cytosol | 31.88 | 34.55 |
| CDX67744 | Canola | cytosol | 33.33 | 34.33 |
| Bra003338.1-P | Field mustard | cytosol | 33.82 | 34.31 |
| TraesCS2D01G502700.1 | Wheat | cytosol, plastid | 26.57 | 33.54 |
| CDX98295 | Canola | cytosol | 29.95 | 31.96 |
| TraesCS4D01G186500.2 | Wheat | cytosol | 26.09 | 31.58 |
| TraesCS2D01G113100.1 | Wheat | cytosol | 30.92 | 29.09 |
| TraesCS5D01G104300.1 | Wheat | cytosol | 26.09 | 26.87 |
| TraesCS6D01G254400.1 | Wheat | cytosol | 22.71 | 26.55 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G399400.2 | EnsemblPlantsGene:TraesCS5D01G399400 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 |
| InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF38 | PFAM:PF00582 |
| PRINTS:PR01438 | SEG:seg | SUPFAM:SSF52402 | TIGR:cd00293 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5D:-:465012035..465012857
Molecular Weight (calculated)
21921.3 Da
IEP (calculated)
7.419
GRAVY (calculated)
0.008
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MWSIEAVIAR HEAGLGITAS ERVVMEESTE ASATARGVAP GAGGAEAARA AGTMKVVVAV DASEESLHAL SWALDNVVRH HPGASVVVLH AQHRVDHFVA
101: HGLAYAPPTA LDSMRRAQEE NSRRVVARAL DVCRQKQASA TAAVVEGDPK EAIYQAVEEM RADLLVLGSR GLGMIKRALL GSVSDYLAHH ACCPVLIVKP
201: PNKAHHK
101: HGLAYAPPTA LDSMRRAQEE NSRRVVARAL DVCRQKQASA TAAVVEGDPK EAIYQAVEEM RADLLVLGSR GLGMIKRALL GSVSDYLAHH ACCPVLIVKP
201: PNKAHHK
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK
Arabidopsis Description
AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.