Factsheet for PGSC0003DMT400084231

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g057000.2.1	Tomato	cytosol	88.27	91.86
CDY53924	Canola	cytosol	29.61	74.65
CDX73846	Canola	cytosol	29.61	74.65
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	46.37	64.34
Bra001427.1-P	Field mustard	cytosol	54.19	48.99
CDY08481	Canola	cytosol	54.19	48.5
CDY47907	Canola	cytosol	54.19	48.5
CDY01070	Canola	cytosol	44.13	48.17
Bra038688.1-P	Field mustard	cytosol	53.63	48.0
KRH71765	Soybean	endoplasmic reticulum	50.28	47.12
CDY08484	Canola	cytosol	50.28	45.0
Bra034800.1-P	Field mustard	cytosol	49.72	44.5
GSMUA_Achr2P08790_001	Banana	cytosol	45.25	43.55
TraesCS5A01G389700.1	Wheat	cytosol	43.02	43.02
AT3G11930.3	Thale cress	cytosol	53.07	42.04
GSMUA_Achr3P25610_001	Banana	cytosol	44.13	41.36
TraesCS5A01G389500.1	Wheat	cytosol	41.34	40.44
TraesCS5D01G399600.1	Wheat	cytosol	41.9	40.32
HORVU5Hr1G095180.3	Barley	cytosol	41.34	40.0
HORVU5Hr1G095160.1	Barley	peroxisome	41.34	39.78
PGSC0003DMT400007287	Potato	cytosol	36.31	39.16
TraesCS5B01G394700.1	Wheat	cytosol	39.66	38.38
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	37.99	37.57
TraesCS5A01G389400.2	Wheat	cytosol	42.46	36.54
Zm00001d034027_P001	Maize	cytosol	37.43	36.02
PGSC0003DMT400061758	Potato	cytosol	31.28	35.67
TraesCS5D01G399400.2	Wheat	cytosol	40.78	35.27
EER93447	Sorghum	cytosol	37.99	35.23
PGSC0003DMT400029496	Potato	cytosol	30.73	35.03
TraesCS5D01G399500.1	Wheat	cytosol	39.11	34.31
PGSC0003DMT400021775	Potato	cytosol	29.05	34.21
PGSC0003DMT400011994	Potato	cytosol	30.17	33.75
PGSC0003DMT400037920	Potato	cytosol	30.17	33.54
TraesCS5B01G394600.1	Wheat	cytosol	40.22	33.03
HORVU5Hr1G047510.1	Barley	cytosol	34.64	32.8
PGSC0003DMT400033576	Potato	cytosol	30.17	31.4
TraesCS5A01G151500.2	Wheat	cytosol	33.52	31.25
TraesCS5D01G156700.1	Wheat	cytosol	32.96	30.89
TraesCS5B01G150100.1	Wheat	cytosol	31.84	30.16
PGSC0003DMT400080606	Potato	cytosol	26.82	27.43
OQU91731	Sorghum	plastid	41.9	23.73

Protein Annotations

EnsemblPlants:PGSC0003DMT400084231	EnsemblPlantsGene:PGSC0003DMG401033888	EntrezGene:102578245	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15
PFAM:PF00582	PGSC:PGSC0003DMG401033888	PRINTS:PR01438	RefSeq:XP_006337956.1	SEG:seg	SUPFAM:SSF52402
UniParc:UPI000296B47F	UniProt:M1D7M0	MapMan:35.1	:	:	:

Description

Universal stress protein family protein [Source:PGSC_GENE;Acc:PGSC0003DMG401033888]

Coordinates

chr1:+:31864038..31866713

Molecular Weight (calculated)

19345.7 Da

IEP (calculated)

7.112

GRAVY (calculated)

0.139

Length

179 amino acids

Sequence
(BLAST)

001: MEAETSAANA PASAASDTPV TMKKMIMVAI DESEESFYAL KWALDNLIND PSIIITLINV QLPFTPMVYP AGPVVFAAPT VVEAVKKGQH ENATRILSRA
101: LHLCKQKMVK AETLILDGDP KDMICQAAHE LHADLLVVGS RGLGKIKRAF LGSVSDYCAH HVQCPILIVK PSKEIPKSS

Best Arabidopsis Sequence Match ( AT3G11930.1 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.