Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73846 | Canola | cytosol | 100.0 | 100.0 |
| CDY27474 | Canola | cytosol | 50.7 | 56.25 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 77.46 | 42.64 |
| CDY01070 | Canola | cytosol | 84.51 | 36.59 |
| Bra001427.1-P | Field mustard | cytosol | 98.59 | 35.35 |
| CDY47907 | Canola | cytosol | 87.32 | 31.0 |
| CDY08481 | Canola | cytosol | 87.32 | 31.0 |
| CDY08484 | Canola | cytosol | 85.92 | 30.5 |
| Solyc01g057000.2.1 | Tomato | cytosol | 73.24 | 30.23 |
| PGSC0003DMT400084231 | Potato | cytosol | 74.65 | 29.61 |
| CDY06041 | Canola | cytosol | 74.65 | 27.89 |
| CDX67744 | Canola | cytosol | 77.46 | 27.36 |
| CDX71957 | Canola | cytosol | 73.24 | 27.23 |
| TraesCS5A01G389700.1 | Wheat | cytosol | 66.2 | 26.26 |
| TraesCS5B01G394700.1 | Wheat | cytosol | 67.61 | 25.95 |
| HORVU5Hr1G095160.1 | Barley | peroxisome | 67.61 | 25.81 |
| TraesCS5A01G389500.1 | Wheat | cytosol | 66.2 | 25.68 |
| HORVU5Hr1G095180.3 | Barley | cytosol | 64.79 | 24.86 |
| TraesCS5D01G399600.1 | Wheat | cytosol | 64.79 | 24.73 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 66.2 | 24.61 |
| CDX98295 | Canola | cytosol | 66.2 | 24.23 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 63.38 | 24.19 |
| EER93447 | Sorghum | cytosol | 64.79 | 23.83 |
| Zm00001d034027_P001 | Maize | cytosol | 61.97 | 23.66 |
| KRH71765 | Soybean | endoplasmic reticulum | 63.38 | 23.56 |
| CDX80128 | Canola | cytosol | 53.52 | 23.46 |
| CDY53014 | Canola | cytosol | 53.52 | 23.46 |
| CDX95730 | Canola | cytosol | 53.52 | 23.46 |
| CDX83322 | Canola | cytosol | 53.52 | 23.46 |
| CDY55534 | Canola | cytosol | 52.11 | 22.84 |
| TraesCS5D01G399400.2 | Wheat | cytosol | 63.38 | 21.74 |
| TraesCS5A01G389400.2 | Wheat | cytosol | 61.97 | 21.15 |
| Os10t0437500-01 | Rice | cytosol, plasma membrane, plastid | 53.52 | 20.99 |
| TraesCS5B01G394600.1 | Wheat | cytosol | 63.38 | 20.64 |
| TraesCS5D01G399500.1 | Wheat | cytosol | 59.15 | 20.59 |
| CDY63308 | Canola | cytosol | 46.48 | 20.25 |
| CDY11426 | Canola | cytosol | 46.48 | 20.25 |
| CDY01904 | Canola | cytosol, peroxisome, plastid | 45.07 | 20.13 |
| CDX96035 | Canola | cytosol, peroxisome, plastid | 45.07 | 20.13 |
| CDY20676 | Canola | cytosol | 47.89 | 19.88 |
| CDY31068 | Canola | cytosol | 47.89 | 19.88 |
| CDY05645 | Canola | cytosol | 46.48 | 19.76 |
| CDX89141 | Canola | cytosol | 45.07 | 19.63 |
| HORVU5Hr1G047510.1 | Barley | cytosol | 52.11 | 19.58 |
| CDX93484 | Canola | cytosol | 46.48 | 19.3 |
| TraesCS5A01G151500.2 | Wheat | cytosol | 52.11 | 19.27 |
| CDX94953 | Canola | cytosol | 46.48 | 19.19 |
| CDY33932 | Canola | cytosol | 45.07 | 19.16 |
| CDX76642 | Canola | cytosol | 43.66 | 18.9 |
| TraesCS5D01G156700.1 | Wheat | cytosol | 49.3 | 18.32 |
| TraesCS5B01G150100.1 | Wheat | cytosol | 47.89 | 17.99 |
| CDY37513 | Canola | cytosol | 42.25 | 17.44 |
| CDY49062 | Canola | cytosol | 42.25 | 17.14 |
| CDY09876 | Canola | cytosol | 39.44 | 16.0 |
| CDX69566 | Canola | cytosol | 39.44 | 15.56 |
| OQU91731 | Sorghum | plastid | 57.75 | 12.97 |
Protein Annotations
| EnsemblPlants:CDY53924 | EnsemblPlantsGene:GSBRNA2T00011703001 | Gene3D:3.40.50.620 | GO:A0A078C9T4 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF15 |
| PFAM:PF00582 | PRINTS:PR01438 | ProteinID:CDY53924 | ProteinID:CDY53924.1 | SUPFAM:SSF52402 | UniParc:UPI0004EF3636 |
| UniProt:A0A078C9T4 | MapMan:35.2 | : | : | : | : |
Description
BnaC03g73550DBnaA03g32010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078C9T4]
Coordinates
chrLK033251:+:67632..68074
Molecular Weight (calculated)
7788.7 Da
IEP (calculated)
8.080
GRAVY (calculated)
0.162
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MQIRAETLVL EGDAKDMICQ AVEQMHVDLL VVGSRGLGKI KRAFLGSVSD YCAHHAKCPI LIVRPPKEIT S
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK
Arabidopsis Description
AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.