CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11426	Canola	cytosol	96.95	97.55
Bra007683.1-P	Field mustard	cytosol	96.34	96.93
CDY63308	Canola	cytosol	92.07	92.64
CDX89141	Canola	cytosol	92.07	92.64
AT3G62550.1	Thale cress	cytosol	90.24	91.36
VIT_07s0005g01350.t01	Wine grape	cytosol	50.61	58.04
KRH69227	Soybean	cytosol	53.05	56.13
KRH31806	Soybean	cytosol	54.88	55.21
KRG96520	Soybean	cytosol	50.0	52.23
CDY27474	Canola	cytosol	18.29	46.88
CDY53924	Canola	cytosol	18.9	43.66
CDX73846	Canola	cytosol	18.9	43.66
GSMUA_Achr1P24830_001	Banana	cytosol	43.29	42.26
Os03t0305400-01	Rice	plastid	42.07	38.33
EER92378	Sorghum	cytosol	40.85	38.07
TraesCS4D01G186500.2	Wheat	cytosol	39.63	38.01
TraesCS4A01G119400.1	Wheat	cytosol	39.02	37.87
CDX83322	Canola	cytosol	35.37	35.8
CDX95730	Canola	cytosol	35.37	35.8
TraesCS4B01G185100.1	Wheat	cytosol	36.59	35.09
CDX80128	Canola	cytosol	34.15	34.57
CDY53014	Canola	cytosol	34.15	34.57
CDX93484	Canola	cytosol	35.98	34.5
CDY55534	Canola	cytosol	33.54	33.95
CDY20676	Canola	cytosol	35.37	33.92
CDY31068	Canola	cytosol	35.37	33.92
CDX94953	Canola	cytosol	35.37	33.72
HORVU4Hr1G054200.1	Barley	mitochondrion	39.63	29.28
CDY01070	Canola	cytosol	28.66	28.66
CDY33932	Canola	cytosol	28.66	28.14
CDY05645	Canola	cytosol	28.66	28.14
CDY01904	Canola	cytosol, peroxisome, plastid	25.61	26.42
CDX96035	Canola	cytosol, peroxisome, plastid	25.61	26.42
CDX67744	Canola	cytosol	31.1	25.37
CDY08484	Canola	cytosol	29.88	24.5
CDY47907	Canola	cytosol	29.27	24.0
CDY08481	Canola	cytosol	29.27	24.0
CDX98295	Canola	cytosol	28.05	23.71
CDY06041	Canola	cytosol	27.44	23.68
CDX71957	Canola	cytosol	27.44	23.56
CDY09876	Canola	cytosol	25.0	23.43
CDX69566	Canola	cytosol	24.39	22.22
CDY49062	Canola	cytosol	23.17	21.71
CDY37513	Canola	cytosol	22.56	21.51

Protein Annotations

EnsemblPlants:CDX76642	EnsemblPlantsGene:GSBRNA2T00127112001	Gene3D:3.40.50.620	GO:A0A078CIR3	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF52
PFAM:PF00582	PRINTS:PR01438	ProteinID:CDX76642	ProteinID:CDX76642.1	SUPFAM:SSF52402	UniParc:UPI0004EE2A06
MapMan:35.2	:	:	:	:	:

Description

BnaC08g32280D

Coordinates

chrLK031808:+:280038..281113

Molecular Weight (calculated)

18551.4 Da

IEP (calculated)

7.406

GRAVY (calculated)

-0.231

Length

164 amino acids

Sequence
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLSV YSSIDAAGEF IVTGDPVAAL KKYEHELVES VMARSRTVYQ YFESDINIER
101: RVGRGDAKEV IRNVVQKLKA DMLVIGTHDY GFFKRALLGS VSEYCAKRVK CPVIIVKKKN PQNN

Best Arabidopsis Sequence Match ( AT3G62550.1 )
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93W91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.