CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014401.1-P	Field mustard	cytosol	99.39	99.39
CDX89141	Canola	cytosol	98.77	98.77
CDY11426	Canola	cytosol	95.09	95.09
CDX76642	Canola	cytosol	92.64	92.07
AT3G62550.1	Thale cress	cytosol	91.41	91.98
VIT_07s0005g01350.t01	Wine grape	cytosol	53.37	60.84
KRH69227	Soybean	cytosol	54.6	57.42
KRH31806	Soybean	cytosol	56.44	56.44
KRG96520	Soybean	cytosol	51.53	53.5
CDY27474	Canola	cytosol	18.4	46.88
CDY53924	Canola	cytosol	20.25	46.48
CDX73846	Canola	cytosol	20.25	46.48
GSMUA_Achr1P24830_001	Banana	cytosol	45.4	44.05
Os03t0305400-01	Rice	plastid	43.56	39.44
EER92378	Sorghum	cytosol	42.33	39.2
TraesCS4D01G186500.2	Wheat	cytosol	41.1	39.18
TraesCS4A01G119400.1	Wheat	cytosol	40.49	39.05
TraesCS4B01G185100.1	Wheat	cytosol	38.04	36.26
CDX95730	Canola	cytosol	35.58	35.8
CDX83322	Canola	cytosol	35.58	35.8
CDX80128	Canola	cytosol	34.36	34.57
CDY53014	Canola	cytosol	34.36	34.57
CDY31068	Canola	cytosol	36.2	34.5
CDY20676	Canola	cytosol	36.2	34.5
CDY55534	Canola	cytosol	33.74	33.95
CDX93484	Canola	cytosol	35.58	33.92
CDX94953	Canola	cytosol	35.58	33.72
CDY01070	Canola	cytosol	30.67	30.49
HORVU4Hr1G054200.1	Barley	mitochondrion	41.1	30.18
CDY33932	Canola	cytosol	30.06	29.34
CDY05645	Canola	cytosol	30.06	29.34
CDX67744	Canola	cytosol	33.13	26.87
CDY01904	Canola	cytosol, peroxisome, plastid	25.77	26.42
CDX96035	Canola	cytosol, peroxisome, plastid	25.77	26.42
CDY08484	Canola	cytosol	31.9	26.0
CDY47907	Canola	cytosol	31.29	25.5
CDY08481	Canola	cytosol	31.29	25.5
CDY06041	Canola	cytosol	29.45	25.26
CDX98295	Canola	cytosol	30.06	25.26
CDX71957	Canola	cytosol	29.45	25.13
CDY09876	Canola	cytosol	26.38	24.57
CDY49062	Canola	cytosol	25.15	23.43
CDX69566	Canola	cytosol	25.77	23.33
CDY37513	Canola	cytosol	23.93	22.67

Protein Annotations

EnsemblPlants:CDY63308	EnsemblPlantsGene:GSBRNA2T00039161001	Gene3D:3.40.50.620	GO:A0A078JBU1	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF52
PFAM:PF00582	PRINTS:PR01438	ProteinID:CDY63308	ProteinID:CDY63308.1	SUPFAM:SSF52402	UniParc:UPI0004EAF67F
UniProt:A0A078JBU1	MapMan:35.2	:	:	:	:

Description

BnaC04g54950DBnaC04g54950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBU1]

Coordinates

chrLK034278:+:1370..2918

Molecular Weight (calculated)

18296.0 Da

IEP (calculated)

5.326

GRAVY (calculated)

-0.237

Length

163 amino acids

Sequence
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSIDAAGFI VTGDPVAALK KYENELVESV MARSRNVYQD FESDINIERK
101: VGRGDAKEVI CNAVQNHKAD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVIIVKKNMP QNN

Best Arabidopsis Sequence Match ( AT3G62550.1 )
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93W91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.