Factsheet for Bra014401.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63308	Canola	cytosol	99.39	99.39
CDX89141	Canola	cytosol	99.39	99.39
Bra007683.1-P	Field mustard	cytosol	95.09	95.09
AT3G62550.1	Thale cress	cytosol	92.02	92.59
VIT_07s0005g01350.t01	Wine grape	cytosol	53.99	61.54
KRH69227	Soybean	cytosol	55.21	58.06
KRH31806	Soybean	cytosol	57.06	57.06
KRG96520	Soybean	cytosol	52.15	54.14
GSMUA_Achr1P24830_001	Banana	cytosol	46.01	44.64
Os03t0305400-01	Rice	plastid	44.17	40.0
EER92378	Sorghum	cytosol	42.94	39.77
TraesCS4D01G186500.2	Wheat	cytosol	41.72	39.77
TraesCS4A01G119400.1	Wheat	cytosol	41.1	39.65
TraesCS4B01G185100.1	Wheat	cytosol	38.65	36.84
Bra000458.1-P	Field mustard	cytosol	34.97	35.19
Bra019995.1-P	Field mustard	cytosol	36.2	34.5
Bra004435.1-P	Field mustard	cytosol	33.74	33.95
Bra021440.1-P	Field mustard	cytosol	33.13	33.33
Bra030795.1-P	Field mustard	cytosol	28.22	32.39
HORVU4Hr1G054200.1	Barley	mitochondrion	41.72	30.63
Bra020665.1-P	Field mustard	cytosol	29.45	28.74
Bra001427.1-P	Field mustard	cytosol	33.13	27.27
Bra003338.1-P	Field mustard	cytosol	33.13	26.47
Bra038688.1-P	Field mustard	cytosol	31.9	26.0
Bra034800.1-P	Field mustard	cytosol	31.9	26.0
Bra007393.1-P	Field mustard	cytosol	29.45	25.26
Bra008745.1-P	Field mustard	cytosol	26.38	24.57
Bra039110.1-P	Field mustard	cytosol	23.93	22.67
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	26.99	22.22

Protein Annotations

EnsemblPlants:Bra014401.1	EnsemblPlants:Bra014401.1-P	EnsemblPlantsGene:Bra014401	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF52
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI0002545448	UniProt:M4DD33	MapMan:35.2

Description

AT3G62550 (E=5e-082) | universal stress protein (USP) family protein

Coordinates

chrA04:-:320558..321440

Molecular Weight (calculated)

18272.0 Da

IEP (calculated)

5.051

GRAVY (calculated)

-0.194

Length

163 amino acids

Sequence
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSIDAAGFI VTGDPVAALK KYENELVESV MARSRNVYQD FESDINIERK
101: VGRGDAKEVI CNAVQNLKAD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVIIVKKNMP QNN

Best Arabidopsis Sequence Match ( AT3G62550.1 )
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93W91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.