Factsheet for Bra004295.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96035	Canola	cytosol, peroxisome, plastid	78.79	98.11
CDY01904	Canola	cytosol, peroxisome, plastid	77.78	96.86
AT1G68300.1	Thale cress	cytosol, peroxisome, plastid	67.68	83.75
GSMUA_Achr4P06800_001	Banana	cytosol	43.94	54.04
GSMUA_Achr3P29470_001	Banana	cytosol	42.93	53.8
TraesCS2D01G502700.1	Wheat	cytosol, plastid	37.88	45.73
TraesCS2A01G502200.1	Wheat	cytosol, plastid	37.37	45.12
TraesCS2B01G530300.1	Wheat	cytosol, plastid	36.87	44.51
VIT_01s0011g03680.t01	Wine grape	cytosol	37.88	44.12
Os01t0511100-01	Rice	plastid	35.86	42.52
OQU75645	Sorghum	cytosol, peroxisome, plastid	36.87	41.01
KXG33084	Sorghum	cytosol, peroxisome, plastid	36.87	41.01
Zm00001d043912_P002	Maize	cytosol, plasma membrane, plastid	37.88	40.11
HORVU2Hr1G111600.2	Barley	cytosol	36.87	33.49
Bra019995.1-P	Field mustard	cytosol	26.77	30.99
Bra004435.1-P	Field mustard	cytosol	25.25	30.86
Bra000458.1-P	Field mustard	cytosol	24.75	30.25
Bra007393.1-P	Field mustard	cytosol	28.79	30.0
Bra021440.1-P	Field mustard	cytosol	23.74	29.01
Bra030795.1-P	Field mustard	cytosol	20.71	28.87
Bra003338.1-P	Field mustard	cytosol	29.29	28.43
Bra007683.1-P	Field mustard	cytosol	23.23	28.22
Bra014401.1-P	Field mustard	cytosol	22.22	26.99
Bra020665.1-P	Field mustard	cytosol	22.22	26.35
Bra008745.1-P	Field mustard	cytosol	23.23	26.29
Bra039110.1-P	Field mustard	cytosol	22.73	26.16
Bra001427.1-P	Field mustard	cytosol	25.25	25.25
Bra038688.1-P	Field mustard	cytosol	24.24	24.0
Bra034800.1-P	Field mustard	cytosol	24.24	24.0

Protein Annotations

EnsemblPlants:Bra004295.1	EnsemblPlants:Bra004295.1-P	EnsemblPlantsGene:Bra004295	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF6
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI000254173A	UniProt:M4CJB1	MapMan:35.2

Description

AT1G68300 (E=1e-043) | universal stress protein (USP) family protein

Coordinates

chrA07:-:17820505..17821259

Molecular Weight (calculated)

21605.1 Da

IEP (calculated)

8.578

GRAVY (calculated)

-0.027

Length

198 amino acids

Sequence
(BLAST)

001: MAEEKSGKKQ VMVAIDESDC SKHALRWTLS YLKDSLADSD IILFTAQPQL DLSSVYASSY GAARKYSPSS VSRLFNLLSM MNVSDTHARA VHKLSALFCF
101: FAAIELINSM QQNYKNAALN RIEEGTKICA ESGVTPKKVM EFGNPKEAIC DAVEKLGVDL LIVGSHGKGA LERTFLGSVS NYCVNKAKCP VLVVRTKA

Best Arabidopsis Sequence Match ( AT1G68300.1 )
(BLAST)

001: MAEEEKSVMK QVMVAIDESE CSKRALQWTL VYLKDSLADS DIILFTAQPH LDLSCVYASS YGAAPIELIN SLQESHKNAG LNRLDEGTKI CAETGVTPRK
101: VLEFGNPKEA ICEAAEKLGV DMLVVGSHGK GALQRTFLGS VSNYCVNNAK CPVLVVRTKA

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9G5]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.