Factsheet for Os01t0511100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33084	Sorghum	cytosol, peroxisome, plastid	77.84	73.03
OQU75645	Sorghum	cytosol, peroxisome, plastid	77.84	73.03
Zm00001d043912_P002	Maize	cytosol, plasma membrane, plastid	76.05	67.91
TraesCS2D01G502700.1	Wheat	cytosol, plastid	65.27	66.46
TraesCS2A01G502200.1	Wheat	cytosol, plastid	64.67	65.85
TraesCS2B01G530300.1	Wheat	cytosol, plastid	64.07	65.24
GSMUA_Achr4P06800_001	Banana	cytosol	56.29	58.39
GSMUA_Achr3P29470_001	Banana	cytosol	55.09	58.23
VIT_01s0011g03690.t01	Wine grape	cytosol	49.7	50.61
HORVU2Hr1G111600.2	Barley	cytosol	65.27	50.0
AT1G68300.1	Thale cress	cytosol, peroxisome, plastid	43.11	45.0
VIT_01s0011g03680.t01	Wine grape	cytosol	44.31	43.53
CDY01904	Canola	cytosol, peroxisome, plastid	41.32	43.4
CDX96035	Canola	cytosol, peroxisome, plastid	40.72	42.77
Os02t0760500-01	Rice	cytosol	41.32	42.59
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	42.52	35.86
Os01t0303800-02	Rice	plasma membrane	38.92	35.71
Os12t0552400-01	Rice	cytosol	31.14	32.5
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	34.13	31.49
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	31.74	31.36
Os07t0673400-01	Rice	cytosol	30.54	29.82
Os03t0305400-01	Rice	plastid	30.54	28.33

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	EntrezGene:4324029	EMBL:AK070914	ProteinID:BAB60909.1	ProteinID:BAB92194.1
ProteinID:BAF05084.1	ProteinID:BAS72380.1	ProteinID:EAZ12090.1	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
EnsemblPlantsGene:Os01g0511100	EnsemblPlants:Os01t0511100-01	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF6
UniProt:Q94E74	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	UniParc:UPI00000ABD30	InterPro:Universal_stress_UspA	InterPro:UspA
RefSeq:XP_015620990.1	SEG:seg	:	:	:	:

Description

UspA domain containing protein. (Os01t0511100-01)

Coordinates

chr1:-:17990846..17993750

Molecular Weight (calculated)

17923.0 Da

IEP (calculated)

7.549

GRAVY (calculated)

0.096

Length

167 amino acids

Sequence
(BLAST)

001: MASPSAPGPK LQKAMVAVDE SEFSHHALEW ALRNLAPTIA PPLLVLTVQP LLPLGYVSAA SFGSPLGTPV VAPELIKAMQ EQQQQLSQAL LDKAKQICAQ
101: HGVAVETMIK VGDPKEMICQ AAEESKVDLL IVGSHSRGPV QRLFLGSVSN YCMHHSKCPV LVVKKQE

Best Arabidopsis Sequence Match ( AT1G68300.1 )
(BLAST)

001: MAEEEKSVMK QVMVAIDESE CSKRALQWTL VYLKDSLADS DIILFTAQPH LDLSCVYASS YGAAPIELIN SLQESHKNAG LNRLDEGTKI CAETGVTPRK
101: VLEFGNPKEA ICEAAEKLGV DMLVVGSHGK GALQRTFLGS VSNYCVNNAK CPVLVVRTKA

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9G5]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.