Factsheet for VIT_01s0011g03680.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29470_001	Banana	cytosol	54.71	58.86
GSMUA_Achr4P06800_001	Banana	cytosol	55.29	58.39
VIT_01s0011g03690.t01	Wine grape	cytosol	49.41	51.22
TraesCS2A01G502200.1	Wheat	cytosol, plastid	44.71	46.34
TraesCS2B01G530300.1	Wheat	cytosol, plastid	44.12	45.73
TraesCS2D01G502700.1	Wheat	cytosol, plastid	44.12	45.73
CDX96035	Canola	cytosol, peroxisome, plastid	41.76	44.65
AT1G68300.1	Thale cress	cytosol, peroxisome, plastid	41.76	44.38
Os01t0511100-01	Rice	plastid	43.53	44.31
CDY01904	Canola	cytosol, peroxisome, plastid	41.18	44.03
KXG33084	Sorghum	cytosol, peroxisome, plastid	44.71	42.7
OQU75645	Sorghum	cytosol, peroxisome, plastid	44.71	42.7
Zm00001d043912_P002	Maize	cytosol, plasma membrane, plastid	44.71	40.64
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	44.12	37.88
VIT_14s0060g01300.t01	Wine grape	cytosol	35.88	35.88
HORVU2Hr1G111600.2	Barley	cytosol	44.71	34.86
VIT_05s0020g01190.t01	Wine grape	cytosol	31.76	34.18
VIT_18s0001g07360.t01	Wine grape	cytosol	32.35	32.74
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	24.71	32.56
VIT_07s0005g01350.t01	Wine grape	cytosol	25.29	30.07
VIT_14s0060g01320.t01	Wine grape	cytosol	34.71	29.06
VIT_14s0066g01130.t01	Wine grape	cytosol	22.94	22.29
VIT_07s0005g00290.t01	Wine grape	cytosol	32.35	16.32

Protein Annotations

EntrezGene:100249069	wikigene:100249069	Gene3D:3.40.50.620	MapMan:35.2	ProteinID:CCB50905	ProteinID:CCB50905.1
UniProt:F6HEW0	EMBL:FN595752	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729	EntrezGene:LOC100249069
wikigene:LOC100249069	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF114	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	TIGR:TC55438	UniParc:UPI00015C7F44	InterPro:Universal_stress_UspA	InterPro:UspA	ArrayExpress:VIT_01s0011g03680
EnsemblPlantsGene:VIT_01s0011g03680	EnsemblPlants:VIT_01s0011g03680.t01	unigene:Vvi.2478	RefSeq:XP_002283457	RefSeq:XP_002283457.1	:

Description

No Description!

Coordinates

chr1:-:3332398..3333689

Molecular Weight (calculated)

18220.1 Da

IEP (calculated)

8.603

GRAVY (calculated)

-0.021

Length

170 amino acids

Sequence
(BLAST)

001: MAVEGGGPQV HKKVMVAIDE NECSYHALMW VLHNLKESIG NSPLVIFNAQ PPPYRNNTFA ASLGTARMYC PVSAAPEFIN NVQEQNKKVS AALLEKAKSI
101: CSSQGVNAET ISEVGDAQQA ICDAVQKLNI TLLILGDRGI GKIKRAFLGS VSNHCVNNAK CPVLVVKKSS

Best Arabidopsis Sequence Match ( AT1G68300.1 )
(BLAST)

001: MAEEEKSVMK QVMVAIDESE CSKRALQWTL VYLKDSLADS DIILFTAQPH LDLSCVYASS YGAAPIELIN SLQESHKNAG LNRLDEGTKI CAETGVTPRK
101: VLEFGNPKEA ICEAAEKLGV DMLVVGSHGK GALQRTFLGS VSNYCVNNAK CPVLVVRTKA

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9G5]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.