Factsheet for VIT_18s0001g07360.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g076200.2.1	Tomato	cytosol, extracellular, plastid	70.24	77.63
Os02t0760500-01	Rice	cytosol	73.21	75.93
TraesCS6D01G293300.1	Wheat	cytosol	71.43	74.07
Zm00001d018135_P002	Maize	extracellular	70.83	73.46
TraesCS6B01G344000.1	Wheat	cytosol	70.24	72.84
EES07563	Sorghum	cytosol	70.24	72.84
GSMUA_Achr6P02230_001	Banana	cytosol	73.81	71.26
KRH16835	Soybean	cytosol, plastid	75.0	70.39
AT1G09740.1	Thale cress	cytosol	70.83	69.59
CDY31068	Canola	cytosol	67.86	66.67
TraesCS6A01G314000.1	Wheat	cytosol	64.29	66.67
PGSC0003DMT400033576	Potato	cytosol	67.86	66.28
Bra030795.1-P	Field mustard	cytosol	55.95	66.2
CDX93484	Canola	cytosol	66.67	65.5
CDY20676	Canola	cytosol	66.67	65.5
Bra019995.1-P	Field mustard	cytosol	66.67	65.5
CDX94953	Canola	cytosol	66.67	65.12
KRH72447	Soybean	cytosol	61.31	60.23
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	29.17	37.98
VIT_05s0020g01190.t01	Wine grape	cytosol	32.14	34.18
VIT_07s0005g01350.t01	Wine grape	cytosol	28.57	33.57
VIT_01s0011g03690.t01	Wine grape	cytosol	32.14	32.93
VIT_14s0060g01300.t01	Wine grape	cytosol	32.74	32.35
VIT_01s0011g03680.t01	Wine grape	cytosol	32.74	32.35
VIT_14s0066g01130.t01	Wine grape	cytosol	28.57	27.43
VIT_14s0060g01320.t01	Wine grape	cytosol	31.55	26.11
VIT_07s0005g00290.t01	Wine grape	cytosol	37.5	18.69

Protein Annotations

EntrezGene:100250647	wikigene:100250647	Gene3D:3.40.50.620	MapMan:35.2	ProteinID:CBI19251	ProteinID:CBI19251.3
UniProt:E0CRU7	EMBL:FN595227	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729	EntrezGene:LOC100250647
wikigene:LOC100250647	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF2	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	UniParc:UPI00015C7ACB	InterPro:Universal_stress_UspA	InterPro:UspA	ArrayExpress:VIT_18s0001g07360	EnsemblPlantsGene:VIT_18s0001g07360
EnsemblPlants:VIT_18s0001g07360.t01	unigene:Vvi.19103	RefSeq:XP_002285692	RefSeq:XP_002285692.1	RefSeq:XP_010664379.1	RefSeq:XP_010664380.1
RefSeq:XP_010664381.1	RefSeq:XP_010664382.1	:	:	:	:

Description

No Description!

Coordinates

chr18:-:5624193..5628323

Molecular Weight (calculated)

17992.8 Da

IEP (calculated)

7.112

GRAVY (calculated)

0.071

Length

168 amino acids

Sequence
(BLAST)

001: MSGNLQRVIV AVDGSEESMK ALRWALDNIK LRSPPSHAEA GSFVILHVQS PPSIATGLNP GAIPFGGPTD LEVPAFTAAI EAHQRRITEA ILDHALKICS
101: DKNVNVKTDV VIGDPKEKIC EAAVNLHADL LVMGSRAFGP IRRMFLGSVS NYCTNHAQCP VMIVKDTA

Best Arabidopsis Sequence Match ( AT1G09740.1 )
(BLAST)

001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.