Factsheet for VIT_08s0032g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73846	Canola	cytosol	42.64	77.46
CDY53924	Canola	cytosol	42.64	77.46
Solyc01g057000.2.1	Tomato	cytosol	63.57	47.67
PGSC0003DMT400084231	Potato	cytosol	64.34	46.37
CDY01070	Canola	cytosol	58.14	45.73
Bra001427.1-P	Field mustard	cytosol	65.12	42.42
CDY08481	Canola	cytosol	63.57	41.0
CDY47907	Canola	cytosol	63.57	41.0
GSMUA_Achr2P08790_001	Banana	cytosol	58.91	40.86
Bra038688.1-P	Field mustard	cytosol	62.79	40.5
KRH71765	Soybean	endoplasmic reticulum	58.91	39.79
CDY08484	Canola	cytosol	59.69	38.5
Bra034800.1-P	Field mustard	cytosol	58.91	38.0
AT3G11930.3	Thale cress	cytosol	63.57	36.28
GSMUA_Achr3P25610_001	Banana	cytosol	53.49	36.13
TraesCS5A01G389700.1	Wheat	cytosol	49.61	35.75
HORVU5Hr1G095180.3	Barley	cytosol	49.61	34.59
HORVU5Hr1G095160.1	Barley	peroxisome	48.84	33.87
TraesCS5D01G399600.1	Wheat	cytosol	48.84	33.87
EER93447	Sorghum	cytosol	48.84	32.64
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	45.74	32.6
TraesCS5A01G389500.1	Wheat	cytosol	45.74	32.24
TraesCS5B01G394700.1	Wheat	cytosol	45.74	31.89
Zm00001d034027_P001	Maize	cytosol	45.74	31.72
TraesCS5A01G389400.2	Wheat	cytosol	49.61	30.77
TraesCS5D01G399400.2	Wheat	cytosol	48.06	29.95
TraesCS5B01G394600.1	Wheat	cytosol	49.61	29.36
VIT_01s0011g03690.t01	Wine grape	cytosol	37.21	29.27
VIT_18s0001g07360.t01	Wine grape	cytosol	37.98	29.17
HORVU5Hr1G047510.1	Barley	cytosol	41.86	28.57
VIT_07s0005g01350.t01	Wine grape	cytosol	31.01	27.97
TraesCS5A01G151500.2	Wheat	cytosol	41.09	27.6
TraesCS5D01G399500.1	Wheat	cytosol	43.41	27.45
TraesCS5D01G156700.1	Wheat	cytosol	40.31	27.23
VIT_05s0020g01190.t01	Wine grape	cytosol	32.56	26.58
TraesCS5B01G150100.1	Wheat	cytosol	38.76	26.45
VIT_01s0011g03680.t01	Wine grape	cytosol	32.56	24.71
VIT_14s0060g01300.t01	Wine grape	cytosol	31.01	23.53
VIT_14s0066g01130.t01	Wine grape	cytosol	29.46	21.71
OQU91731	Sorghum	plastid	46.51	18.99
VIT_14s0060g01320.t01	Wine grape	cytosol	29.46	18.72
VIT_07s0005g00290.t01	Wine grape	cytosol	31.78	12.17

Protein Annotations

EntrezGene:100254700	wikigene:100254700	Gene3D:3.40.50.620	MapMan:35.2	ProteinID:CBI39085	ProteinID:CBI39085.3
UniProt:D7U8M1	EMBL:FN596742	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729	EntrezGene:LOC100254700
wikigene:LOC100254700	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15	InterPro:Rossmann-like_a/b/a_fold
SUPFAM:SSF52402	TIGR:TC65963	UniParc:UPI0001BE4C83	InterPro:Universal_stress_UspA	InterPro:UspA	ArrayExpress:VIT_08s0032g00590
EnsemblPlantsGene:VIT_08s0032g00590	EnsemblPlants:VIT_08s0032g00590.t01	unigene:Vvi.11668	RefSeq:XP_002266746	RefSeq:XP_002266746.2	:

Description

No Description!

Coordinates

chr8:-:3917600..3921496

Molecular Weight (calculated)

14198.4 Da

IEP (calculated)

8.647

GRAVY (calculated)

-0.043

Length

129 amino acids

Sequence
(BLAST)

001: MVTVVHVQQP FHNYVLPAGP GIYATSTVIE SVRKAQEQNS SVILSRALRL CKDKMVKAET LILDGDPKEM ICQAAEQMHV DLLLVGSRGL SKLKRAFLGS
101: VSDYCAHHAK CPILIVKPPE EKLSRESST

Best Arabidopsis Sequence Match ( AT3G11930.1 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.