Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G389500.1 | Wheat | cytosol | 70.27 | 71.04 |
| CDX73846 | Canola | cytosol | 25.95 | 67.61 |
| CDY53924 | Canola | cytosol | 25.95 | 67.61 |
| TraesCS5B01G394600.1 | Wheat | cytosol | 74.59 | 63.3 |
| TraesCS5D01G399500.1 | Wheat | cytosol | 67.57 | 61.27 |
| Zm00001d034027_P001 | Maize | cytosol | 58.92 | 58.6 |
| EER93447 | Sorghum | cytosol | 57.84 | 55.44 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 31.89 | 45.74 |
| CDY01070 | Canola | cytosol | 38.92 | 43.9 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 42.16 | 41.94 |
| Solyc01g057000.2.1 | Tomato | cytosol | 38.92 | 41.86 |
| PGSC0003DMT400084231 | Potato | cytosol | 38.38 | 39.66 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 40.0 | 38.74 |
| Bra001427.1-P | Field mustard | cytosol | 39.46 | 36.87 |
| KRH71765 | Soybean | endoplasmic reticulum | 37.84 | 36.65 |
| Bra038688.1-P | Field mustard | cytosol | 39.46 | 36.5 |
| CDY08481 | Canola | cytosol | 38.92 | 36.0 |
| CDY47907 | Canola | cytosol | 38.92 | 36.0 |
| TraesCS5B01G150100.1 | Wheat | cytosol | 36.76 | 35.98 |
| CDY08484 | Canola | cytosol | 38.38 | 35.5 |
| Bra034800.1-P | Field mustard | cytosol | 38.38 | 35.5 |
| TraesCS6B01G344000.1 | Wheat | cytosol | 30.81 | 35.19 |
| AT3G58450.1 | Thale cress | cytosol | 38.38 | 34.8 |
| TraesCS2B01G530300.1 | Wheat | cytosol, plastid | 30.27 | 34.15 |
| CDY06041 | Canola | cytosol | 34.59 | 33.68 |
| Bra007393.1-P | Field mustard | cytosol | 34.59 | 33.68 |
| TraesCS2B01G131300.1 | Wheat | cytosol | 31.35 | 33.53 |
| TraesCS2B01G130500.1 | Wheat | cytosol | 30.81 | 33.33 |
| CDX71957 | Canola | cytosol | 34.05 | 32.98 |
| CDX67744 | Canola | cytosol | 35.68 | 32.84 |
| AT3G11930.3 | Thale cress | cytosol | 40.0 | 32.74 |
| TraesCS5B01G097600.1 | Wheat | cytosol | 29.73 | 32.54 |
| Bra003338.1-P | Field mustard | cytosol | 35.68 | 32.35 |
| TraesCS2B01G131200.1 | Wheat | cytosol | 31.35 | 32.22 |
| CDX98295 | Canola | cytosol | 32.97 | 31.44 |
| TraesCS4B01G185100.1 | Wheat | cytosol | 28.65 | 30.99 |
| TraesCS2B01G131400.1 | Wheat | cytosol | 30.81 | 26.03 |
| TraesCS6B01G301700.1 | Wheat | cytosol | 24.86 | 25.99 |
| TraesCS6B01G312700.1 | Wheat | cytosol | 24.86 | 25.99 |
| TraesCS5B01G097500.1 | Wheat | cytosol | 28.11 | 25.87 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G394700.1 | EnsemblPlantsGene:TraesCS5B01G394700 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 |
| InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF38 | PFAM:PF00582 |
| PRINTS:PR01438 | SUPFAM:SSF52402 | TIGR:cd00293 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5B:-:572378743..572390785
Molecular Weight (calculated)
20256.5 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.040
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVVAAVDAS EESLHALSWA LDNVVRPHPG ASVVVLHVQH HANHFAYPVA GHDLLKTNAP EFALKNYSEF LFIMQSMNDR LAYVPPTAMD AMRRTQAENS
101: RNVVARALDV CRQKQASVTA AVVEGDAKDA ICQAVEDMRA DLLVLGSRGL GMIKRAFLGS VSDYLAHHAR CPVLIVKPPN KARHE
101: RNVVARALDV CRQKQASVTA AVVEGDAKDA ICQAVEDMRA DLLVLGSRGL GMIKRAFLGS VSDYLAHHAR CPVLIVKPPN KARHE
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK
Arabidopsis Description
AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.