Factsheet for TraesCS5D01G399500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G389500.1	Wheat	cytosol	80.39	89.62
TraesCS5D01G399400.2	Wheat	cytosol	80.88	79.71
TraesCS5D01G399600.1	Wheat	cytosol	68.14	74.73
TraesCS5B01G394700.1	Wheat	cytosol	61.27	67.57
CDX73846	Canola	cytosol	20.59	59.15
CDY53924	Canola	cytosol	20.59	59.15
Zm00001d034027_P001	Maize	cytosol	51.47	56.45
EER93447	Sorghum	cytosol	52.45	55.44
GSMUA_Achr2P08790_001	Banana	cytosol	40.2	44.09
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	27.45	43.41
CDY01070	Canola	cytosol	32.84	40.85
GSMUA_Achr3P25610_001	Banana	cytosol	37.25	39.79
PGSC0003DMT400084231	Potato	cytosol	34.31	39.11
Solyc01g057000.2.1	Tomato	cytosol	32.84	38.95
KRH71765	Soybean	endoplasmic reticulum	34.8	37.17
CDY08484	Canola	cytosol	35.78	36.5
Bra034800.1-P	Field mustard	cytosol	35.78	36.5
TraesCS2D01G113000.1	Wheat	cytosol	31.37	36.16
TraesCS5D01G156700.1	Wheat	cytosol	33.82	36.13
CDY08481	Canola	cytosol	35.29	36.0
CDY47907	Canola	cytosol	35.29	36.0
Bra038688.1-P	Field mustard	cytosol	35.29	36.0
Bra001427.1-P	Field mustard	cytosol	34.8	35.86
TraesCS6D01G293300.1	Wheat	cytosol	28.43	35.8
TraesCS5D01G104200.1	Wheat	cytosol	28.92	34.91
TraesCS2D01G112900.1	Wheat	cytosol	30.39	34.44
CDY06041	Canola	cytosol	31.86	34.21
Bra007393.1-P	Field mustard	cytosol	31.86	34.21
TraesCS2D01G112300.1	Wheat	cytosol	28.92	34.1
CDX71957	Canola	cytosol	31.86	34.03
AT3G58450.1	Thale cress	cytosol	33.82	33.82
TraesCS2D01G502700.1	Wheat	cytosol, plastid	26.96	33.54
Bra003338.1-P	Field mustard	cytosol	32.84	32.84
CDX67744	Canola	cytosol	32.35	32.84
AT3G11930.3	Thale cress	cytosol	36.27	32.74
TraesCS4D01G186500.2	Wheat	cytosol	26.47	31.58
CDX98295	Canola	cytosol	29.9	31.44
TraesCS2D01G113100.1	Wheat	cytosol	30.39	28.18
TraesCS5D01G104300.1	Wheat	cytosol	25.0	25.37
TraesCS6D01G254400.1	Wheat	cytosol	21.08	24.29

Protein Annotations

EnsemblPlants:TraesCS5D01G399500.1	EnsemblPlantsGene:TraesCS5D01G399500	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF38	PFAM:PF00582
PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:-:465021835..465022640

Molecular Weight (calculated)

21412.8 Da

IEP (calculated)

8.505

GRAVY (calculated)

0.062

Length

204 amino acids

Sequence
(BLAST)

001: MWSIEAVIAR HEASASERVV MEESTEAAAT ASGVAPGAGG GEATRSPAAT MKVVVAVDAS EESLHALSWA LDHVVRLHPG ASVVVVHAQH RVDRSAYAGL
101: AYVPPTAMDA MRRTQAENTR KVVSRALDVC KQKQASATAV LVVGDAKEAI CQAVEDMRAD LLVLGSRGLG MVRRALLGSV SDYFANHARC PVLIVKPPNK
201: AGPK

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.