Factsheet for Solyc01g057000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
nucleus 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084231	Potato	cytosol	91.86	88.27
CDY53924	Canola	cytosol	30.23	73.24
CDX73846	Canola	cytosol	30.23	73.24
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	47.67	63.57
CDY01070	Canola	cytosol	45.35	47.56
Bra001427.1-P	Field mustard	cytosol	54.65	47.47
CDY08481	Canola	cytosol	54.07	46.5
CDY47907	Canola	cytosol	54.07	46.5
Bra038688.1-P	Field mustard	cytosol	53.49	46.0
KRH71765	Soybean	endoplasmic reticulum	49.42	44.5
CDY08484	Canola	cytosol	51.74	44.5
Bra034800.1-P	Field mustard	cytosol	51.16	44.0
GSMUA_Achr2P08790_001	Banana	cytosol	47.09	43.55
TraesCS5A01G389700.1	Wheat	cytosol	44.19	42.46
AT3G11930.3	Thale cress	cytosol	53.49	40.71
GSMUA_Achr3P25610_001	Banana	cytosol	44.77	40.31
HORVU5Hr1G095180.3	Barley	cytosol	43.02	40.0
HORVU5Hr1G095160.1	Barley	peroxisome	43.02	39.78
TraesCS5D01G399600.1	Wheat	cytosol	43.02	39.78
TraesCS5B01G394700.1	Wheat	cytosol	41.86	38.92
TraesCS5A01G389500.1	Wheat	cytosol	41.28	38.8
Solyc04g076200.2.1	Tomato	cytosol, extracellular, plastid	33.72	38.16
Solyc01g100370.2.1	Tomato	cytosol	36.05	37.35
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	38.95	37.02
TraesCS5A01G389400.2	Wheat	cytosol	43.6	36.06
Zm00001d034027_P001	Maize	cytosol	38.37	35.48
TraesCS5D01G399400.2	Wheat	cytosol	42.44	35.27
EER93447	Sorghum	cytosol	39.53	35.23
Solyc01g066810.2.1	Tomato	cytosol	31.98	34.81
Solyc06g084540.2.1	Tomato	cytosol	31.4	34.39
TraesCS5D01G399500.1	Wheat	cytosol	38.95	32.84
TraesCS5B01G394600.1	Wheat	cytosol	41.28	32.57
Solyc06g009050.2.1	Tomato	cytosol, nucleus	30.23	32.3
HORVU5Hr1G047510.1	Barley	cytosol	35.47	32.28
Solyc12g099520.1.1	Tomato	cytosol	29.65	31.88
Solyc05g054270.2.1	Tomato	cytosol	28.49	31.01
TraesCS5A01G151500.2	Wheat	cytosol	34.3	30.73
TraesCS5D01G156700.1	Wheat	cytosol	33.72	30.37
TraesCS5B01G150100.1	Wheat	cytosol	32.56	29.63
Solyc12g062860.1.1	Tomato	cytosol, extracellular	25.58	25.14
OQU91731	Sorghum	plastid	42.44	23.1

Protein Annotations

EnsemblPlants:Solyc01g057000.2.1	EnsemblPlantsGene:Solyc01g057000.2	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15	PFAM:PF00582
PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI0002761B01	UniProt:K4AVR4	MapMan:35.1	:

Description

No Description!

Coordinates

chr1:+:57898185..57900586

Molecular Weight (calculated)

18936.2 Da

IEP (calculated)

7.029

GRAVY (calculated)

0.023

Length

172 amino acids

Sequence
(BLAST)

001: MEAETSAASD TPVTRKKMIM VAIDESEESF YSLKWALDNL INDPSIIITL INVQIPFTPM VYPAGPVVFA TPTVVEAVRK GQQENATRIL SRALHLCQQK
101: MVKAETLIVE GDPKDMICQT AHELHVDLLV IGSRGLGKIK RAFLGSVSDY CAHHVQCPIL IVKPPKENPK SS

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.