Factsheet for Bra038688.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47907	Canola	cytosol	99.0	99.0
CDY08481	Canola	cytosol	99.0	99.0
Bra001427.1-P	Field mustard	cytosol	86.5	87.37
Bra034800.1-P	Field mustard	cytosol	84.0	84.0
AT3G11930.3	Thale cress	cytosol	87.5	77.43
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	40.5	62.79
PGSC0003DMT400084231	Potato	cytosol	48.0	53.63
Solyc01g057000.2.1	Tomato	cytosol	46.0	53.49
KRH71765	Soybean	endoplasmic reticulum	47.0	49.21
Bra007393.1-P	Field mustard	cytosol	45.5	47.89
Bra003338.1-P	Field mustard	cytosol	48.5	47.55
TraesCS5A01G389700.1	Wheat	cytosol	41.5	46.37
TraesCS5D01G399600.1	Wheat	cytosol	41.5	44.62
HORVU5Hr1G095180.3	Barley	cytosol	40.5	43.78
HORVU5Hr1G095160.1	Barley	peroxisome	40.5	43.55
GSMUA_Achr2P08790_001	Banana	cytosol	40.5	43.55
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	38.5	42.54
GSMUA_Achr3P25610_001	Banana	cytosol	40.5	42.41
TraesCS5A01G389500.1	Wheat	cytosol	38.0	41.53
Zm00001d034027_P001	Maize	cytosol	37.5	40.32
TraesCS5B01G394700.1	Wheat	cytosol	36.5	39.46
TraesCS5D01G399400.2	Wheat	cytosol	39.5	38.16
TraesCS5B01G394600.1	Wheat	cytosol	41.0	37.61
EER93447	Sorghum	cytosol	36.0	37.31
Bra004435.1-P	Field mustard	cytosol	30.0	37.04
Bra021440.1-P	Field mustard	cytosol	30.0	37.04
TraesCS5A01G389400.2	Wheat	cytosol	38.0	36.54
HORVU5Hr1G047510.1	Barley	cytosol	34.5	36.51
Bra000458.1-P	Field mustard	cytosol	29.5	36.42
TraesCS5D01G156700.1	Wheat	cytosol	34.0	35.6
TraesCS5A01G151500.2	Wheat	cytosol	34.0	35.42
TraesCS5D01G399500.1	Wheat	cytosol	36.0	35.29
TraesCS5B01G150100.1	Wheat	cytosol	33.0	34.92
Bra014401.1-P	Field mustard	cytosol	26.0	31.9
Bra007683.1-P	Field mustard	cytosol	25.5	31.29
Bra020665.1-P	Field mustard	cytosol	26.0	31.14
Bra030795.1-P	Field mustard	cytosol	21.0	29.58
Bra019995.1-P	Field mustard	cytosol	25.0	29.24
Bra039110.1-P	Field mustard	cytosol	24.0	27.91
Bra008745.1-P	Field mustard	cytosol	24.0	27.43
OQU91731	Sorghum	plastid	41.5	26.27
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	24.0	24.24

Protein Annotations

EnsemblPlants:Bra038688.1	EnsemblPlants:Bra038688.1-P	EnsemblPlantsGene:Bra038688	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15
PFAM:PF00582	PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	UniParc:UPI000254541E	UniProt:M4FC72
MapMan:35.1	:	:	:	:	:

Description

AT3G11930 (E=5e-087) | universal stress protein (USP) family protein

Coordinates

chrA01:-:26604126..26605265

Molecular Weight (calculated)

21385.7 Da

IEP (calculated)

5.872

GRAVY (calculated)

0.018

Length

200 amino acids

Sequence
(BLAST)

001: MSEDQAAAVK ETSAVEKQPE TTGAEAPTVT ITKRMMVAID ESDSSFYALQ WVIDHFSNLL MTTEAAEAEG GLLTVVHVQS PSHHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQEASAALL SRALQMCRAK QIRTETLVLE GEAKDMICQA VEQMHVDLLV VGSRGLGKIK RAFIGSVSDY CAHHANCPIL IVKPPKEITT

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.