Factsheet for Bra020665.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33932	Canola	cytosol	99.4	99.4
AT5G49050.1	Thale cress	cytosol	60.48	67.33
VIT_05s0020g01190.t01	Wine grape	cytosol	54.49	57.59
Bra000458.1-P	Field mustard	cytosol	55.69	57.41
Bra021440.1-P	Field mustard	cytosol	53.89	55.56
Bra004435.1-P	Field mustard	cytosol	52.69	54.32
PGSC0003DMT400021775	Potato	cytosol	49.1	53.95
Solyc01g066810.2.1	Tomato	cytosol	50.3	53.16
PGSC0003DMT400029496	Potato	cytosol	49.7	52.87
Solyc05g054270.2.1	Tomato	cytosol	49.7	52.53
KRH22975	Soybean	cytosol, peroxisome, plastid	49.7	50.61
Solyc12g099520.1.1	Tomato	cytosol	47.9	50.0
PGSC0003DMT400011994	Potato	cytosol	47.9	50.0
Bra019995.1-P	Field mustard	cytosol	32.34	31.58
Bra030795.1-P	Field mustard	cytosol	26.35	30.99
Bra007683.1-P	Field mustard	cytosol	28.74	29.45
Bra014401.1-P	Field mustard	cytosol	28.74	29.45
Bra007393.1-P	Field mustard	cytosol	30.54	26.84
Bra001427.1-P	Field mustard	cytosol	31.74	26.77
Bra038688.1-P	Field mustard	cytosol	31.14	26.0
Bra034800.1-P	Field mustard	cytosol	28.14	23.5
Bra008745.1-P	Field mustard	cytosol	24.55	23.43
Bra003338.1-P	Field mustard	cytosol	28.14	23.04
Bra039110.1-P	Field mustard	cytosol	23.35	22.67
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	26.35	22.22

Protein Annotations

EnsemblPlants:Bra020665.1	EnsemblPlants:Bra020665.1-P	EnsemblPlantsGene:Bra020665	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF16
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI0002546501	UniProt:M4DVX1	MapMan:35.2

Description

AT5G49050 (E=2e-053) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: universal stress protein (USP) family protein (TAIR:AT2G47710.1); Has 83 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA02:+:23858114..23858617

Molecular Weight (calculated)

18007.7 Da

IEP (calculated)

7.383

GRAVY (calculated)

0.032

Length

167 amino acids

Sequence
(BLAST)

001: MASGSERVVV VGVDDSTHSY HALETALDLF FTPFKSNPQF KLVVLHARLP ATSVLGFAGP GTVDIIPLVE QDLDKTADLV KKKCTDVCSA KSVEITSLEV
101: VEGDPRNIML EAAERHHASV LVLGSHGYGA VKRVFLGSVS DYLAHHAHCS VMIVKKPKAK HASNDKH

Best Arabidopsis Sequence Match ( AT5G49050.1 )
(BLAST)

001: MPRVNIGPDN NAQIEITTLQ SQSKSRKLKK IKMASGSERV VVVGVDDSAH SYHALETALD LFFIPFKANP RFKLVVLHAR PTATFFLGVA GPGTVDIIPM
101: VEEDLNKTAD LVKKKCAEVC SAKSVEISSL EVIEGDPRNI MLEAVERHHA

Arabidopsis Description

Universal stress A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FI65]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.