Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05645 | Canola | cytosol | 68.0 | 61.08 |
| CDY33932 | Canola | cytosol | 67.33 | 60.48 |
| Bra020665.1-P | Field mustard | cytosol | 67.33 | 60.48 |
| AT2G47710.1 | Thale cress | cytosol | 38.67 | 35.8 |
| VIT_05s0020g01190.t01 | Wine grape | cytosol | 37.33 | 35.44 |
| Solyc05g054270.2.1 | Tomato | cytosol | 34.0 | 32.28 |
| PGSC0003DMT400021775 | Potato | cytosol | 32.67 | 32.24 |
| PGSC0003DMT400029496 | Potato | cytosol | 32.67 | 31.21 |
| KRH22975 | Soybean | cytosol, peroxisome, plastid | 34.0 | 31.1 |
| PGSC0003DMT400011994 | Potato | cytosol | 32.67 | 30.62 |
| Solyc12g099520.1.1 | Tomato | cytosol | 32.67 | 30.62 |
| Solyc01g066810.2.1 | Tomato | cytosol | 32.0 | 30.38 |
| AT1G09740.1 | Thale cress | cytosol | 26.0 | 22.81 |
| AT3G62550.1 | Thale cress | cytosol | 17.33 | 16.05 |
| AT3G58450.1 | Thale cress | cytosol | 20.0 | 14.71 |
| AT1G68300.1 | Thale cress | cytosol, peroxisome, plastid | 15.33 | 14.38 |
| AT3G11930.3 | Thale cress | cytosol | 19.33 | 12.83 |
| AT5G14680.1 | Thale cress | cytosol, nucleus, plastid | 14.67 | 12.57 |
| AT3G01520.1 | Thale cress | cytosol | 12.67 | 10.86 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:834964 | ProteinID:AED95766.1 | ArrayExpress:AT5G49050 | EnsemblPlantsGene:AT5G49050 |
| RefSeq:AT5G49050 | TAIR:AT5G49050 | RefSeq:AT5G49050-TAIR-G | EnsemblPlants:AT5G49050.1 | TAIR:AT5G49050.1 | Unigene:At.55442 |
| ProteinID:BAB10329.1 | GO:GO:0006950 | GO:GO:0008150 | InterPro:IPR014729 | RefSeq:NP_199716.1 | PFAM:PF00582 |
| PANTHER:PTHR31964 | PANTHER:PTHR31964:SF16 | UniProt:Q9FI65 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | UniParc:UPI00000A0D20 |
| InterPro:UspA | SEG:seg | : | : | : | : |
Description
Universal stress A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FI65]
Coordinates
chr5:+:19883929..19884381
Molecular Weight (calculated)
16436.0 Da
IEP (calculated)
7.633
GRAVY (calculated)
-0.070
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRVNIGPDN NAQIEITTLQ SQSKSRKLKK IKMASGSERV VVVGVDDSAH SYHALETALD LFFIPFKANP RFKLVVLHAR PTATFFLGVA GPGTVDIIPM
101: VEEDLNKTAD LVKKKCAEVC SAKSVEISSL EVIEGDPRNI MLEAVERHHA
101: VEEDLNKTAD LVKKKCAEVC SAKSVEISSL EVIEGDPRNI MLEAVERHHA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.