CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020665.1-P	Field mustard	cytosol	99.4	99.4
CDY05645	Canola	cytosol	97.6	97.6
CDY27474	Canola	cytosol	26.95	70.31
AT5G49050.1	Thale cress	cytosol	60.48	67.33
VIT_05s0020g01190.t01	Wine grape	cytosol	54.49	57.59
CDX83322	Canola	cytosol	55.69	57.41
CDX95730	Canola	cytosol	55.69	57.41
CDY55534	Canola	cytosol	53.89	55.56
CDY53014	Canola	cytosol	52.69	54.32
CDX80128	Canola	cytosol	52.69	54.32
PGSC0003DMT400021775	Potato	cytosol	49.1	53.95
Solyc01g066810.2.1	Tomato	cytosol	49.7	52.53
Solyc05g054270.2.1	Tomato	cytosol	49.7	52.53
PGSC0003DMT400029496	Potato	cytosol	49.1	52.23
KRH22975	Soybean	cytosol, peroxisome, plastid	49.7	50.61
Solyc12g099520.1.1	Tomato	cytosol	47.9	50.0
PGSC0003DMT400011994	Potato	cytosol	47.9	50.0
CDY53924	Canola	cytosol	19.16	45.07
CDX73846	Canola	cytosol	19.16	45.07
CDY31068	Canola	cytosol	34.73	33.92
CDY20676	Canola	cytosol	34.13	33.33
CDX94953	Canola	cytosol	32.93	31.98
CDX93484	Canola	cytosol	32.34	31.58
CDY63308	Canola	cytosol	29.34	30.06
CDX89141	Canola	cytosol	28.74	29.45
CDY11426	Canola	cytosol	28.74	29.45
CDX76642	Canola	cytosol	28.14	28.66
CDY01070	Canola	cytosol	28.14	28.66
CDY01904	Canola	cytosol, peroxisome, plastid	26.95	28.3
CDX96035	Canola	cytosol, peroxisome, plastid	26.35	27.67
CDY06041	Canola	cytosol	30.54	26.84
CDX71957	Canola	cytosol	29.94	26.18
CDY47907	Canola	cytosol	30.54	25.5
CDY08481	Canola	cytosol	30.54	25.5
CDY08484	Canola	cytosol	28.74	24.0
CDX67744	Canola	cytosol	28.74	23.88
CDY09876	Canola	cytosol	23.95	22.86
CDY37513	Canola	cytosol	23.35	22.67
CDY49062	Canola	cytosol	23.35	22.29
CDX69566	Canola	cytosol	23.95	22.22
CDX98295	Canola	cytosol	25.75	22.16

Protein Annotations

EnsemblPlants:CDY33932	EnsemblPlantsGene:GSBRNA2T00055443001	Gene3D:3.40.50.620	GO:A0A078H8Q6	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF16
PFAM:PF00582	PRINTS:PR01438	ProteinID:CDY33932	ProteinID:CDY33932.1	SUPFAM:SSF52402	UniParc:UPI0004EE35A6
UniProt:A0A078H8Q6	MapMan:35.2	:	:	:	:

Description

BnaA02g30550DBnaA02g30550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8Q6]

Coordinates

chrLK032324:-:333471..333974

Molecular Weight (calculated)

18035.7 Da

IEP (calculated)

7.383

GRAVY (calculated)

0.047

Length

167 amino acids

Sequence
(BLAST)

001: MASGSERVVV VGVDDSTHSY HALETALDLF FTPFKSNPQF KLVVLHARLP ATSVLGFAGP GTVDIIPLVE QDLDKTADLV KKKCTDVCSA KSVEITSLEV
101: VEGDPRNIML EAAERHHASV LVLGSHGYGA VKRVFLGSVS DYLAHHAHCS VMIVKKPKVK HASNDKH

Best Arabidopsis Sequence Match ( AT5G49050.1 )
(BLAST)

001: MPRVNIGPDN NAQIEITTLQ SQSKSRKLKK IKMASGSERV VVVGVDDSAH SYHALETALD LFFIPFKANP RFKLVVLHAR PTATFFLGVA GPGTVDIIPM
101: VEEDLNKTAD LVKKKCAEVC SAKSVEISSL EVIEGDPRNI MLEAVERHHA

Arabidopsis Description

Universal stress A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FI65]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.