Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37513 | Canola | cytosol | 96.0 | 97.67 |
| AT3G01520.1 | Thale cress | cytosol | 85.71 | 85.71 |
| CDY09876 | Canola | cytosol | 77.71 | 77.71 |
| PGSC0003DMT400080606 | Potato | cytosol | 75.43 | 75.43 |
| CDX69566 | Canola | cytosol | 76.57 | 74.44 |
| VIT_14s0066g01130.t01 | Wine grape | cytosol | 74.29 | 74.29 |
| Solyc12g062860.1.1 | Tomato | cytosol, extracellular | 74.29 | 74.29 |
| KRH56590 | Soybean | cytosol, nucleus | 70.29 | 70.29 |
| KRG93269 | Soybean | cytosol, nucleus | 69.71 | 69.71 |
| Zm00001d051584_P001 | Maize | cytosol, extracellular | 68.0 | 67.23 |
| EES05648 | Sorghum | cytosol | 68.0 | 67.23 |
| TraesCS6D01G254400.1 | Wheat | cytosol | 66.86 | 66.1 |
| GSMUA_Achr1P26770_001 | Banana | cytosol | 62.86 | 65.87 |
| TraesCS6A01G274200.1 | Wheat | cytosol | 66.29 | 65.54 |
| TraesCS6B01G301700.1 | Wheat | cytosol | 66.29 | 65.54 |
| TraesCS6B01G312700.1 | Wheat | cytosol | 65.71 | 64.97 |
| HORVU6Hr1G069260.1 | Barley | vacuole | 66.29 | 57.14 |
| CDX73846 | Canola | cytosol | 17.14 | 42.25 |
| CDY53924 | Canola | cytosol | 17.14 | 42.25 |
| CDY27474 | Canola | cytosol | 12.0 | 32.81 |
| CDX96035 | Canola | cytosol, peroxisome, plastid | 25.14 | 27.67 |
| CDY06041 | Canola | cytosol | 29.71 | 27.37 |
| CDX71957 | Canola | cytosol | 29.71 | 27.23 |
| CDY01904 | Canola | cytosol, peroxisome, plastid | 24.57 | 27.04 |
| CDY20676 | Canola | cytosol | 26.29 | 26.9 |
| CDY31068 | Canola | cytosol | 25.71 | 26.32 |
| CDX67744 | Canola | cytosol | 29.71 | 25.87 |
| CDY55534 | Canola | cytosol | 23.43 | 25.31 |
| CDY63308 | Canola | cytosol | 23.43 | 25.15 |
| CDX93484 | Canola | cytosol | 24.57 | 25.15 |
| CDX94953 | Canola | cytosol | 24.57 | 25.0 |
| CDX89141 | Canola | cytosol | 22.86 | 24.54 |
| CDY47907 | Canola | cytosol | 28.0 | 24.5 |
| CDY08481 | Canola | cytosol | 28.0 | 24.5 |
| CDY01070 | Canola | cytosol | 22.86 | 24.39 |
| CDX83322 | Canola | cytosol | 22.29 | 24.07 |
| CDX95730 | Canola | cytosol | 22.29 | 24.07 |
| CDY11426 | Canola | cytosol | 22.29 | 23.93 |
| CDX98295 | Canola | cytosol | 26.29 | 23.71 |
| CDY53014 | Canola | cytosol | 21.71 | 23.46 |
| CDX80128 | Canola | cytosol | 21.71 | 23.46 |
| CDY05645 | Canola | cytosol | 22.29 | 23.35 |
| CDY33932 | Canola | cytosol | 22.29 | 23.35 |
| CDX76642 | Canola | cytosol | 21.71 | 23.17 |
| CDY08484 | Canola | cytosol | 25.14 | 22.0 |
Protein Annotations
| EnsemblPlants:CDY49062 | EnsemblPlantsGene:GSBRNA2T00092282001 | Gene3D:3.40.50.620 | GO:A0A078IGH5 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF49 |
| PFAM:PF00582 | PRINTS:PR01438 | ProteinID:CDY49062 | ProteinID:CDY49062.1 | SUPFAM:SSF52402 | UniParc:UPI0004EC1109 |
| UniProt:A0A078IGH5 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g48900DBnaC05g48900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGH5]
Coordinates
chrLK032808:+:101946..103182
Molecular Weight (calculated)
19710.5 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.352
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREPTRVMV AVNESTIKGK PHPSISSKRA FEWTLEKMVR SNASDFKILL LHVHVVDEDG FDEVDSIYAS PDDFKDMRES NKSKGLHLLE FFVNKCHEFG
101: VSCEAWIKKG DPKDVICQEV SRVRPDLLVL GSRGLGRFQK VFVGTVSGFC VKHAECPVLT IKRNADETPS DLADD
101: VSCEAWIKKG DPKDVICQEV SRVRPDLLVL GSRGLGRFQK VFVGTVSGFC VKHAECPVLT IKRNADETPS DLADD
001: MGSEPTKVMV AVNASTIKDY PNPSISCKRA FEWTLEKIVR SNTSDFKILL LHVQVVDEDG FDDVDSIYAS PEDFRDMRQS NKAKGLHLLE FFVNKCHEIG
101: VGCEAWIKTG DPKDVICQEV KRVRPDFLVV GSRGLGRFQK VFVGTVSAFC VKHAECPVMT IKRNADETPS DPADD
101: VGCEAWIKTG DPKDVICQEV KRVRPDFLVV GSRGLGRFQK VFVGTVSAFC VKHAECPVMT IKRNADETPS DPADD
Arabidopsis Description
Universal stress protein A-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.