Factsheet for GSMUA_Achr1P26770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G254400.1	Wheat	cytosol	78.44	74.01
TraesCS6B01G301700.1	Wheat	cytosol	77.84	73.45
TraesCS6A01G274200.1	Wheat	cytosol	77.84	73.45
Zm00001d051584_P001	Maize	cytosol, extracellular	77.25	72.88
TraesCS6B01G312700.1	Wheat	cytosol	77.25	72.88
EES05648	Sorghum	cytosol	76.65	72.32
PGSC0003DMT400080606	Potato	cytosol	74.85	71.43
Solyc12g062860.1.1	Tomato	cytosol, extracellular	73.65	70.29
VIT_14s0066g01130.t01	Wine grape	cytosol	71.86	68.57
KRG93269	Soybean	cytosol, nucleus	70.06	66.86
AT5G14680.1	Thale cress	cytosol, nucleus, plastid	69.46	66.29
KRH56590	Soybean	cytosol, nucleus	69.46	66.29
CDY09876	Canola	cytosol	69.46	66.29
Bra008745.1-P	Field mustard	cytosol	68.86	65.71
AT3G01520.1	Thale cress	cytosol	66.47	63.43
HORVU6Hr1G069260.1	Barley	vacuole	76.65	63.05
CDY49062	Canola	cytosol	65.87	62.86
Bra039110.1-P	Field mustard	cytosol	64.07	62.21
CDY37513	Canola	cytosol	64.07	62.21
CDX69566	Canola	cytosol	66.47	61.67
GSMUA_Achr3P29470_001	Banana	cytosol	29.34	31.01
GSMUA_Achr4P06800_001	Banana	cytosol	29.34	30.43
GSMUA_Achr2P08790_001	Banana	cytosol	27.54	24.73
GSMUA_Achr6P02230_001	Banana	cytosol	25.15	24.14
GSMUA_Achr5P00180_001	Banana	cytosol	22.16	24.03
GSMUA_Achr8P06640_001	Banana	cytosol	22.16	23.12
GSMUA_Achr3P25610_001	Banana	cytosol	25.75	22.51
GSMUA_Achr1P24830_001	Banana	cytosol	21.56	21.43
GSMUA_Achr6P20400_001	Banana	cytosol	19.76	21.43

Protein Annotations

EnsemblPlants:GSMUA_Achr1P26770_001	EnsemblPlants:GSMUA_Achr1T26770_001	EnsemblPlantsGene:GSMUA_Achr1G26770_001	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF49
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI000294EE0F	UniProt:M0S3D4	MapMan:35.1

Description

Universal stress protein A-like protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G26770_001]

Coordinates

chr1:-:22657792..22668049

Molecular Weight (calculated)

18926.6 Da

IEP (calculated)

6.300

GRAVY (calculated)

-0.323

Length

167 amino acids

Sequence
(BLAST)

001: MIGVNESSIR GYPHPSISSR TAFDWTLQKI VRSNAAGFKL LFLHVQIPDE DGFDDMDSIY ASPDDFQSMH QKEKIRGIHL LQYFVEHSHQ LGIQCEAWIR
101: KGDPKEVICQ EVKKVQPDIL VVGSRGLGPF QRVFVGTVSE YLVKHVDCPV VTIKRKADEA PHDPIDD

Best Arabidopsis Sequence Match ( AT5G14680.1 )
(BLAST)

001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ2]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.