Factsheet for TraesCS6D01G254400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G301700.1	Wheat	cytosol	98.87	98.87
TraesCS6A01G274200.1	Wheat	cytosol	98.87	98.87
TraesCS6B01G312700.1	Wheat	cytosol	98.31	98.31
Zm00001d051584_P001	Maize	cytosol, extracellular	89.83	89.83
EES05648	Sorghum	cytosol	89.27	89.27
HORVU6Hr1G069260.1	Barley	vacuole	96.61	84.24
PGSC0003DMT400080606	Potato	cytosol	77.97	78.86
GSMUA_Achr1P26770_001	Banana	cytosol	74.01	78.44
Solyc12g062860.1.1	Tomato	cytosol, extracellular	76.27	77.14
VIT_14s0066g01130.t01	Wine grape	cytosol	74.58	75.43
KRG93269	Soybean	cytosol, nucleus	74.01	74.86
AT5G14680.1	Thale cress	cytosol, nucleus, plastid	72.88	73.71
KRH56590	Soybean	cytosol, nucleus	72.88	73.71
CDY09876	Canola	cytosol	72.32	73.14
Bra008745.1-P	Field mustard	cytosol	71.75	72.57
AT3G01520.1	Thale cress	cytosol	68.93	69.71
CDX69566	Canola	cytosol	69.49	68.33
CDY37513	Canola	cytosol	64.97	66.86
Bra039110.1-P	Field mustard	cytosol	64.97	66.86
CDY49062	Canola	cytosol	66.1	66.86
TraesCS6D01G293300.1	Wheat	cytosol	27.68	30.25
TraesCS2D01G502700.1	Wheat	cytosol, plastid	25.42	27.44
TraesCS5D01G399600.1	Wheat	cytosol	26.55	25.27
TraesCS5D01G156700.1	Wheat	cytosol	26.55	24.61
TraesCS2D01G112300.1	Wheat	cytosol	23.16	23.7
TraesCS5D01G399400.2	Wheat	cytosol	26.55	22.71
TraesCS4D01G186500.2	Wheat	cytosol	21.47	22.22
TraesCS5D01G104200.1	Wheat	cytosol	20.34	21.3
TraesCS2D01G112900.1	Wheat	cytosol	21.47	21.11
TraesCS5D01G399500.1	Wheat	cytosol	24.29	21.08
TraesCS2D01G113000.1	Wheat	cytosol	20.34	20.34
TraesCS5D01G104300.1	Wheat	cytosol	21.47	18.91
TraesCS2D01G113100.1	Wheat	cytosol	22.6	18.18

Protein Annotations

EnsemblPlants:TraesCS6D01G254400.1	EnsemblPlantsGene:TraesCS6D01G254400	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF49	PFAM:PF00582
PRINTS:PR01438	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6D:-:358977070..358982515

Molecular Weight (calculated)

19989.9 Da

IEP (calculated)

6.502

GRAVY (calculated)

-0.325

Length

177 amino acids

Sequence
(BLAST)

001: MADSSAPTRV MMAVNESSLK GYPHPSISCR SAFDWMLSKL VRSNTDGFHL LFLHVQVPDE DGFDDMDSIY ASPTDFQSMK QRDKIRGIHL LEYFVNECHR
101: LGIKCEAWTK HGDPKEVICH EVKRVQPDLL VVGSRGLGPF QRVFVGTVSE FCVKHAECPV ITIKRKANEA PQDPIDD

Best Arabidopsis Sequence Match ( AT5G14680.1 )
(BLAST)

001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ2]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.