Factsheet for Bra039110.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37513	Canola	cytosol	100.0	100.0
AT3G01520.1	Thale cress	cytosol	85.47	84.0
Bra008745.1-P	Field mustard	cytosol	79.65	78.29
PGSC0003DMT400080606	Potato	cytosol	76.16	74.86
VIT_14s0066g01130.t01	Wine grape	cytosol	75.58	74.29
Solyc12g062860.1.1	Tomato	cytosol, extracellular	75.0	73.71
KRH56590	Soybean	cytosol, nucleus	70.35	69.14
KRG93269	Soybean	cytosol, nucleus	69.77	68.57
Zm00001d051584_P001	Maize	cytosol, extracellular	67.44	65.54
EES05648	Sorghum	cytosol	67.44	65.54
TraesCS6D01G254400.1	Wheat	cytosol	66.86	64.97
TraesCS6B01G301700.1	Wheat	cytosol	66.28	64.41
TraesCS6A01G274200.1	Wheat	cytosol	66.28	64.41
GSMUA_Achr1P26770_001	Banana	cytosol	62.21	64.07
TraesCS6B01G312700.1	Wheat	cytosol	65.7	63.84
HORVU6Hr1G069260.1	Barley	vacuole	66.28	56.16
Bra007393.1-P	Field mustard	cytosol	29.65	26.84
Bra021440.1-P	Field mustard	cytosol	23.84	25.31
Bra019995.1-P	Field mustard	cytosol	25.0	25.15
Bra030795.1-P	Field mustard	cytosol	20.35	24.65
Bra003338.1-P	Field mustard	cytosol	29.07	24.51
Bra001427.1-P	Field mustard	cytosol	27.91	24.24
Bra000458.1-P	Field mustard	cytosol	22.67	24.07
Bra038688.1-P	Field mustard	cytosol	27.91	24.0
Bra014401.1-P	Field mustard	cytosol	22.67	23.93
Bra004435.1-P	Field mustard	cytosol	22.09	23.46
Bra020665.1-P	Field mustard	cytosol	22.67	23.35
Bra007683.1-P	Field mustard	cytosol	22.09	23.31
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	26.16	22.73
Bra034800.1-P	Field mustard	cytosol	25.58	22.0

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.1	EnsemblPlantsGene:Bra039110	EnsemblPlants:Bra039110.1	EnsemblPlants:Bra039110.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0008150	GO:GO:0016020	GO:GO:0016208	InterPro:IPR014729	UniProt:M4FDD9	PFAM:PF00582
PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF49	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	UniParc:UPI00015D98C5
InterPro:Universal_stress_UspA	InterPro:UspA	:	:	:	:

Description

AT3G01520 (E=1e-082) | universal stress protein (USP) family protein

Coordinates

chrA05:+:23913601..23914568

Molecular Weight (calculated)

19332.2 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.328

Length

172 amino acids

Sequence
(BLAST)

001: MEREPTRVMV AVNESTIKGK PHPSISSKRA FEWTLEKMIR SNTSDFKILL LHVHVVDEDG FDEVDSIYAS PDDFKESNKS KGLHLLEFFV KKCHEIGVSC
101: EAWIKKGDPK DVICQEVSRV RPDLLVLGSR GLGRFQKVFV GTVSGFCVKH AECPVLTIKR NADETPSDLA DD

Best Arabidopsis Sequence Match ( AT3G01520.1 )
(BLAST)

001: MGSEPTKVMV AVNASTIKDY PNPSISCKRA FEWTLEKIVR SNTSDFKILL LHVQVVDEDG FDDVDSIYAS PEDFRDMRQS NKAKGLHLLE FFVNKCHEIG
101: VGCEAWIKTG DPKDVICQEV KRVRPDFLVV GSRGLGRFQK VFVGTVSAFC VKHAECPVMT IKRNADETPS DPADD

Arabidopsis Description

Universal stress protein A-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.