Factsheet for Bra000458.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000239.1-P
Bra000458.1-P
Bra003338.1-P
Bra004435.1-P
Bra007393.1-P
Bra021440.1-P
Bra029936.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	Bra000239.1-P	AT2G41760.1	21798944
AT2G47710.1	Bra000458.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra004435.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra021440.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra029936.1-P	AT3G49160.1	21798944
AT2G47710.1	Bra003338.1-P	AT3G58450.1	21798944
AT2G47710.1	Bra007393.1-P	AT3G58450.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83322	Canola	cytosol	100.0	100.0
CDX95730	Canola	cytosol	99.38	99.38
AT2G47710.1	Thale cress	cytosol	91.36	91.36
Bra004435.1-P	Field mustard	cytosol	89.51	89.51
Bra021440.1-P	Field mustard	cytosol	88.27	88.27
PGSC0003DMT400061758	Potato	cytosol	65.43	67.52
Solyc06g084540.2.1	Tomato	cytosol	65.43	67.52
GSMUA_Achr5P00180_001	Banana	cytosol	62.96	66.23
KRH71566	Soybean	cytosol	63.58	65.19
GSMUA_Achr6P20400_001	Banana	cytosol	60.49	63.64
KRG96437	Soybean	cytosol	63.58	63.19
KRH31878	Soybean	cytosol	63.58	62.8
TraesCS5B01G097600.1	Wheat	cytosol	65.43	62.72
TraesCS5D01G104200.1	Wheat	cytosol	65.43	62.72
GSMUA_Achr8P06640_001	Banana	cytosol	61.73	62.5
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	64.81	62.13
Solyc06g009050.2.1	Tomato	cytosol, nucleus	61.73	62.11
PGSC0003DMT400037920	Potato	cytosol	61.73	62.11
Zm00001d023830_P001	Maize	cytosol, extracellular, mitochondrion	64.81	61.4
EES17172	Sorghum	cytosol	66.67	61.36
TraesCS5A01G092000.1	Wheat	cytosol	64.81	61.05
HORVU5Hr1G024160.3	Barley	cytosol	63.58	58.86
Os12t0552400-01	Rice	cytosol	57.41	58.12
Bra020665.1-P	Field mustard	cytosol	57.41	55.69
TraesCS5B01G097500.1	Wheat	cytosol	61.11	49.25
TraesCS5D01G104300.1	Wheat	cytosol	61.11	49.25
Zm00001d041638_P001	Maize	cytosol	53.09	48.86
TraesCS5A01G092100.1	Wheat	cytosol	60.49	48.76
HORVU5Hr1G024170.1	Barley	cytosol	60.49	48.51
OQU79284	Sorghum	mitochondrion	51.85	45.16
Bra014401.1-P	Field mustard	cytosol	35.19	34.97
Bra007683.1-P	Field mustard	cytosol	35.19	34.97
VIT_07s0005g00290.t01	Wine grape	cytosol	71.6	34.42
Bra019995.1-P	Field mustard	cytosol	34.57	32.75
Bra001427.1-P	Field mustard	cytosol	37.65	30.81
Bra007393.1-P	Field mustard	cytosol	35.8	30.53
Bra030795.1-P	Field mustard	cytosol	26.54	30.28
Bra038688.1-P	Field mustard	cytosol	36.42	29.5
Bra034800.1-P	Field mustard	cytosol	35.8	29.0
Bra003338.1-P	Field mustard	cytosol	33.95	26.96
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	30.25	24.75
Bra008745.1-P	Field mustard	cytosol	26.54	24.57
Bra039110.1-P	Field mustard	cytosol	24.07	22.67

Protein Annotations

EnsemblPlants:Bra000458.1	EnsemblPlants:Bra000458.1-P	EnsemblPlantsGene:Bra000458	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF16
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI000253FF38	UniProt:M4C8D0	MapMan:35.2

Description

AT2G47710 (E=3e-084) | universal stress protein (USP) family protein

Coordinates

chrA03:-:11209380..11210302

Molecular Weight (calculated)

17391.2 Da

IEP (calculated)

7.640

GRAVY (calculated)

0.219

Length

162 amino acids

Sequence
(BLAST)

001: MATGEEKPVM VVGVDESEQS TYALEWTLDR FFAPYAPNFP FKLIIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAVK VIEKAKALCL SKSVHGAMIE
101: VFEGDARNIL CEVVDKHHAS LLVVGSHGYG AIKRAVLGSV SDYCAHHAHC SVMIVKKPKI KV

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.