Factsheet for TraesCS5B01G097500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G242200.1
TraesCS1B01G253700.1
TraesCS1D01G242100.1
TraesCS5A01G092000.1
TraesCS5A01G092100.1
TraesCS5A01G151500.2
TraesCS5A01G389400.2
TraesCS5A01G389500.1
TraesCS5A01G389700.1
TraesCS5B01G097500.1
TraesCS5B01G097600.1
TraesCS5B01G150100.1
TraesCS5B01G394600.1
TraesCS5B01G394700.1
TraesCS5D01G104200.1
TraesCS5D01G104300.1
TraesCS5D01G156700.1
TraesCS5D01G399400.2
TraesCS5D01G399500.1
TraesCS5D01G399600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	TraesCS1A01G242200.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS1B01G253700.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS1D01G242100.1	AT2G41760.1	21798944
AT2G47710.1	TraesCS5A01G092000.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5A01G092100.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5B01G097500.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5B01G097600.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5D01G104200.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5D01G104300.1	AT2G47710.1	21798944
AT2G47710.1	TraesCS5A01G151500.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389400.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389500.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5A01G389700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G150100.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G394600.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5B01G394700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G156700.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399400.2	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399500.1	AT3G58450.1	21798944
AT2G47710.1	TraesCS5D01G399600.1	AT3G58450.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G104300.1	Wheat	cytosol	98.01	98.01
TraesCS5A01G092100.1	Wheat	cytosol	97.01	97.01
HORVU5Hr1G024170.1	Barley	cytosol	95.52	95.05
Os12t0552400-01	Rice	cytosol	58.71	73.75
CDY27474	Canola	cytosol	23.38	73.44
TraesCS5B01G097600.1	Wheat	cytosol	61.19	72.78
GSMUA_Achr5P00180_001	Banana	cytosol	51.74	67.53
Zm00001d041638_P001	Maize	cytosol	57.71	65.91
GSMUA_Achr6P20400_001	Banana	cytosol	50.25	65.58
GSMUA_Achr8P06640_001	Banana	cytosol	49.25	61.88
OQU79284	Sorghum	mitochondrion	57.21	61.83
Bra000458.1-P	Field mustard	cytosol	49.25	61.11
CDX95730	Canola	cytosol	49.25	61.11
CDX83322	Canola	cytosol	49.25	61.11
PGSC0003DMT400061758	Potato	cytosol	47.26	60.51
CDY53014	Canola	cytosol	48.76	60.49
Bra004435.1-P	Field mustard	cytosol	48.76	60.49
CDX80128	Canola	cytosol	48.76	60.49
Solyc06g084540.2.1	Tomato	cytosol	46.77	59.87
KRG96437	Soybean	cytosol	47.76	58.9
AT2G47710.1	Thale cress	cytosol	47.26	58.64
Bra021440.1-P	Field mustard	cytosol	46.77	58.02
CDY55534	Canola	cytosol	46.77	58.02
KRH71566	Soybean	cytosol	45.27	57.59
KRH31878	Soybean	cytosol	45.27	55.49
PGSC0003DMT400037920	Potato	cytosol	43.28	54.04
Solyc06g009050.2.1	Tomato	cytosol, nucleus	43.28	54.04
TraesCS2B01G131300.1	Wheat	cytosol	40.8	47.4
TraesCS2B01G131200.1	Wheat	cytosol	42.29	47.22
TraesCS2B01G130500.1	Wheat	cytosol	39.3	46.2
TraesCS2B01G530300.1	Wheat	cytosol, plastid	27.36	33.54
TraesCS2B01G131400.1	Wheat	cytosol	35.82	32.88
TraesCS6B01G344000.1	Wheat	cytosol	25.87	32.1
TraesCS4B01G185100.1	Wheat	cytosol	26.37	30.99
VIT_07s0005g00290.t01	Wine grape	cytosol	51.74	30.86
TraesCS5B01G150100.1	Wheat	cytosol	27.86	29.63
TraesCS5B01G394700.1	Wheat	cytosol	25.87	28.11
TraesCS5B01G394600.1	Wheat	cytosol	27.36	25.23
TraesCS6B01G301700.1	Wheat	cytosol	18.41	20.9
TraesCS6B01G312700.1	Wheat	cytosol	18.41	20.9

Protein Annotations

EnsemblPlants:TraesCS5B01G097500.1	EnsemblPlantsGene:TraesCS5B01G097500	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF118	PFAM:PF00582
PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:

Description

No Description!

Coordinates

chr5B:-:128852473..128853953

Molecular Weight (calculated)

21627.8 Da

IEP (calculated)

7.221

GRAVY (calculated)

-0.262

Length

201 amino acids

Sequence
(BLAST)

001: MAAEGEALMA AERAETSTAP AVGAESGANG KPAASGKPAM VLGIDESEHS YYALEWTIHH FFAPGQPQQY HLIVVSAKPP AASVIGIAGI GTAELLPRVE
101: LDLKRASARV IDKAKEQCSH VTDVSYEVKE GDARNVLCEA VERHHADMLV MGSHGYGAFK RAVLGSVSDY CTHNAHCTVM IVKKPKHHKK HEQLGFHRKE
201: A

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.