Factsheet for Bra004435.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000239.1-P
Bra000458.1-P
Bra003338.1-P
Bra004435.1-P
Bra007393.1-P
Bra021440.1-P
Bra029936.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G47710.1	Bra000239.1-P	AT2G41760.1	21798944
AT2G47710.1	Bra000458.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra004435.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra021440.1-P	AT2G47710.1	21798944
AT2G47710.1	Bra029936.1-P	AT3G49160.1	21798944
AT2G47710.1	Bra003338.1-P	AT3G58450.1	21798944
AT2G47710.1	Bra007393.1-P	AT3G58450.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80128	Canola	cytosol	100.0	100.0
CDY53014	Canola	cytosol	98.15	98.15
Bra000458.1-P	Field mustard	cytosol	89.51	89.51
AT2G47710.1	Thale cress	cytosol	85.8	85.8
Bra021440.1-P	Field mustard	cytosol	84.57	84.57
PGSC0003DMT400061758	Potato	cytosol	68.52	70.7
Solyc06g084540.2.1	Tomato	cytosol	67.9	70.06
GSMUA_Achr5P00180_001	Banana	cytosol	65.43	68.83
KRH71566	Soybean	cytosol	66.67	68.35
KRH31878	Soybean	cytosol	66.67	65.85
GSMUA_Achr6P20400_001	Banana	cytosol	61.73	64.94
GSMUA_Achr8P06640_001	Banana	cytosol	62.96	63.75
PGSC0003DMT400037920	Potato	cytosol	62.96	63.35
Solyc06g009050.2.1	Tomato	cytosol, nucleus	62.96	63.35
KRG96437	Soybean	cytosol	62.96	62.58
TraesCS5D01G104200.1	Wheat	cytosol	64.81	62.13
TraesCS5B01G097600.1	Wheat	cytosol	64.81	62.13
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	64.2	61.54
Zm00001d023830_P001	Maize	cytosol, extracellular, mitochondrion	64.81	61.4
EES17172	Sorghum	cytosol	66.05	60.8
TraesCS5A01G092000.1	Wheat	cytosol	64.2	60.47
HORVU5Hr1G024160.3	Barley	cytosol	62.96	58.29
Os12t0552400-01	Rice	cytosol	56.79	57.5
Bra020665.1-P	Field mustard	cytosol	54.32	52.69
Zm00001d041638_P001	Maize	cytosol	56.17	51.7
TraesCS5A01G092100.1	Wheat	cytosol	60.49	48.76
TraesCS5B01G097500.1	Wheat	cytosol	60.49	48.76
TraesCS5D01G104300.1	Wheat	cytosol	60.49	48.76
HORVU5Hr1G024170.1	Barley	cytosol	59.88	48.02
OQU79284	Sorghum	mitochondrion	53.09	46.24
VIT_07s0005g00290.t01	Wine grape	cytosol	72.22	34.72
Bra007683.1-P	Field mustard	cytosol	33.95	33.74
Bra014401.1-P	Field mustard	cytosol	33.95	33.74
Bra019995.1-P	Field mustard	cytosol	34.57	32.75
Bra001427.1-P	Field mustard	cytosol	37.65	30.81
Bra030795.1-P	Field mustard	cytosol	26.54	30.28
Bra038688.1-P	Field mustard	cytosol	37.04	30.0
Bra007393.1-P	Field mustard	cytosol	34.57	29.47
Bra034800.1-P	Field mustard	cytosol	35.8	29.0
Bra003338.1-P	Field mustard	cytosol	34.57	27.45
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	30.86	25.25
Bra008745.1-P	Field mustard	cytosol	25.93	24.0
Bra039110.1-P	Field mustard	cytosol	23.46	22.09

Protein Annotations

EnsemblPlants:Bra004435.1	EnsemblPlants:Bra004435.1-P	EnsemblPlantsGene:Bra004435	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF106
PFAM:PF00582	PRINTS:PR01438	SUPFAM:SSF52402	UniParc:UPI0002547FD2	UniProt:M4CJQ1	MapMan:35.2

Description

AT2G47710 (E=1e-079) | universal stress protein (USP) family protein

Coordinates

chrA05:+:105902..106800

Molecular Weight (calculated)

17496.2 Da

IEP (calculated)

7.007

GRAVY (calculated)

0.146

Length

162 amino acids

Sequence
(BLAST)

001: MATGEEKPVM VVGMDESEQS TYALEWTLDR FFAPYAPNFP FKLFIVHAKP NAVSAVGLAG PGAAEVLPYV DTDLKHIAAR VIEMAKGICQ SKSVDGAMFE
101: VFEGDARSIL CDVVDKHHAS LLVVGSHGYG AIKRAVLGSV SDYCAHHAHC SVMIVKKPKI KH

Best Arabidopsis Sequence Match ( AT2G47710.1 )
(BLAST)

001: MATGDGKSVM VVGVDDSEQS TYALEWTLDR FFAPYAPNYP FKLFIVHAKP NAVSAVGLAG PGTAEVVPYV DADLKHTAAK VVEKAKAICQ SRSVHGAVIE
101: VFEGDARNIL CEVVDKHHAS ILVVGSHGYG AIKRAVLGST SDYCAHHAHC SVMIVKKPKI KV

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O82240]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.