Factsheet for Bra034800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08484	Canola	cytosol	99.5	99.5
CDY01070	Canola	cytosol	78.5	95.73
Bra038688.1-P	Field mustard	cytosol	84.0	84.0
Bra001427.1-P	Field mustard	cytosol	80.0	80.81
AT3G11930.3	Thale cress	cytosol	80.5	71.24
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	38.0	58.91
Solyc01g057000.2.1	Tomato	cytosol	44.0	51.16
PGSC0003DMT400084231	Potato	cytosol	44.5	49.72
KRH71765	Soybean	endoplasmic reticulum	45.5	47.64
TraesCS5A01G389700.1	Wheat	cytosol	40.5	45.25
Bra003338.1-P	Field mustard	cytosol	45.0	44.12
Bra007393.1-P	Field mustard	cytosol	41.5	43.68
GSMUA_Achr2P08790_001	Banana	cytosol	40.5	43.55
TraesCS5D01G399600.1	Wheat	cytosol	40.0	43.01
GSMUA_Achr3P25610_001	Banana	cytosol	40.0	41.88
HORVU5Hr1G095180.3	Barley	cytosol	38.5	41.62
HORVU5Hr1G095160.1	Barley	peroxisome	38.0	40.86
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	36.5	40.33
TraesCS5A01G389500.1	Wheat	cytosol	36.5	39.89
TraesCS5B01G394700.1	Wheat	cytosol	35.5	38.38
Zm00001d034027_P001	Maize	cytosol	35.0	37.63
TraesCS5D01G399400.2	Wheat	cytosol	38.5	37.2
Bra021440.1-P	Field mustard	cytosol	29.5	36.42
TraesCS5B01G394600.1	Wheat	cytosol	39.5	36.24
Bra000458.1-P	Field mustard	cytosol	29.0	35.8
Bra004435.1-P	Field mustard	cytosol	29.0	35.8
TraesCS5D01G399500.1	Wheat	cytosol	36.5	35.78
TraesCS5A01G389400.2	Wheat	cytosol	37.0	35.58
EER93447	Sorghum	cytosol	34.0	35.23
HORVU5Hr1G047510.1	Barley	cytosol	32.5	34.39
TraesCS5D01G156700.1	Wheat	cytosol	32.5	34.03
TraesCS5A01G151500.2	Wheat	cytosol	32.5	33.85
TraesCS5B01G150100.1	Wheat	cytosol	31.0	32.8
Bra014401.1-P	Field mustard	cytosol	26.0	31.9
Bra007683.1-P	Field mustard	cytosol	25.5	31.29
Bra030795.1-P	Field mustard	cytosol	20.0	28.17
Bra020665.1-P	Field mustard	cytosol	23.5	28.14
Bra019995.1-P	Field mustard	cytosol	23.5	27.49
Bra008745.1-P	Field mustard	cytosol	23.0	26.29
Bra039110.1-P	Field mustard	cytosol	22.0	25.58
OQU91731	Sorghum	plastid	39.0	24.68
Bra004295.1-P	Field mustard	cytosol, peroxisome, plastid	24.0	24.24

Protein Annotations

EnsemblPlants:Bra034800.1	EnsemblPlants:Bra034800.1-P	EnsemblPlantsGene:Bra034800	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150
InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15
PFAM:PF00582	PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	UniParc:UPI0002547551	UniProt:M4F154
MapMan:35.2	:	:	:	:	:

Description

AT3G11930 (E=5e-076) | universal stress protein (USP) family protein

Coordinates

chrA05:-:21468485..21469796

Molecular Weight (calculated)

21814.4 Da

IEP (calculated)

5.942

GRAVY (calculated)

-0.044

Length

200 amino acids

Sequence
(BLAST)

001: MAEDQATAAI ETSKVEEKQP QTTEAEAPGV TRTKRIMVAI DESDSSFYAL QWVIDHFSTL LLTTEGAEAE RGLLTVVHVQ PTFHHFAPFP AGPGATAVYP
101: PSLMIESVKK TQQETSAALL LRALQMCRAK QIRSETLVFE GEAKEMICQA VEQMPVDLLV VGSRGLGKIR RALIGSVSDY CAHHANCPIL IVKPPKEITS

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.