Factsheet for Os10t0437500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 17407182
plastid: 27992503

msms PMID: 17407182 doi

F Chen, Y Yuan, Q Li, Z He

National Key laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, The Chinese Academy of Sciences, Shanghai, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G047510.1	Barley	cytosol	67.96	65.08
TraesCS5A01G151500.2	Wheat	cytosol	67.4	63.54
TraesCS5D01G156700.1	Wheat	cytosol	66.85	63.35
TraesCS5B01G150100.1	Wheat	cytosol	65.75	62.96
CDY53924	Canola	cytosol	20.99	53.52
CDX73846	Canola	cytosol	20.99	53.52
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	32.6	45.74
GSMUA_Achr2P08790_001	Banana	cytosol	46.41	45.16
CDY01070	Canola	cytosol	38.67	42.68
Os07t0673400-01	Rice	cytosol	39.78	42.11
OQU91731	Sorghum	plastid	70.72	40.51
GSMUA_Achr3P25610_001	Banana	cytosol	41.44	39.27
KRH71765	Soybean	endoplasmic reticulum	41.44	39.27
Solyc01g057000.2.1	Tomato	cytosol	37.02	38.95
CDY08481	Canola	cytosol	42.54	38.5
CDY47907	Canola	cytosol	42.54	38.5
Bra038688.1-P	Field mustard	cytosol	42.54	38.5
PGSC0003DMT400084231	Potato	cytosol	37.57	37.99
Os12t0552400-01	Rice	cytosol	33.15	37.5
Bra001427.1-P	Field mustard	cytosol	40.33	36.87
CDY08484	Canola	cytosol	40.33	36.5
Bra034800.1-P	Field mustard	cytosol	40.33	36.5
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	33.7	36.09
AT3G58450.1	Thale cress	cytosol	40.33	35.78
Os02t0760500-01	Rice	cytosol	31.49	35.19
Os01t0511100-01	Rice	plastid	31.49	34.13
AT3G11930.3	Thale cress	cytosol	42.54	34.07
CDX67744	Canola	cytosol	37.57	33.83
CDY06041	Canola	cytosol	34.81	33.16
Bra007393.1-P	Field mustard	cytosol	34.81	33.16
Bra003338.1-P	Field mustard	cytosol	37.02	32.84
CDX98295	Canola	cytosol	34.81	32.47
CDX71957	Canola	cytosol	34.25	32.46
Os01t0303800-02	Rice	plasma membrane	29.83	29.67
Os03t0305400-01	Rice	plastid	26.52	26.67

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	EntrezGene:4348710	ProteinID:AAP53941.1	EMBL:AK107152	ProteinID:BAF26591.1
ProteinID:BAT11003.1	ProteinID:EAZ16194.1	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729	EnsemblPlantsGene:Os10g0437500
EnsemblPlants:Os10t0437500-01	PFAM:PF00582	PRINTS:PR01438	PANTHER:PTHR31964	PANTHER:PTHR31964:SF15	UniProt:Q7XE49
InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	UniParc:UPI00001A3C52	InterPro:Universal_stress_UspA	InterPro:UspA	RefSeq:XP_015614560.1
SEG:seg	:	:	:	:	:

Description

Rossmann-like alpha/beta/alpha sandwich fold domain containing protein. (Os10t0437500-01)

Coordinates

chr10:+:15663637..15664570

Molecular Weight (calculated)

18882.6 Da

IEP (calculated)

5.866

GRAVY (calculated)

0.057

Length

181 amino acids

Sequence
(BLAST)

001: MKVLVAVDDS RGSHRALSWV LDHLFFPAAA TGDGGEEEQV PRPAPELVLV HAIEPLHHVM FPVGPGSAVY GAASMMEAVR AAQAENARNL LVRARLICER
101: RGVAAATVAV EGEPREALCR AAEDAGAGLL VVGSRGLGAL KRAFLGSVSD YCAHRASCPI MVVKPPPDAG DEDDGGHCTS N

Best Arabidopsis Sequence Match ( AT3G11930.2 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.