Factsheet for Os03t0305400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G119400.1	Wheat	cytosol	72.78	77.51
TraesCS4D01G186500.2	Wheat	cytosol	73.33	77.19
EER92378	Sorghum	cytosol	74.44	76.14
TraesCS4B01G185100.1	Wheat	cytosol	70.56	74.27
HORVU4Hr1G054200.1	Barley	mitochondrion	73.33	59.46
GSMUA_Achr1P24830_001	Banana	cytosol	52.78	56.55
KRH31806	Soybean	cytosol	43.89	48.47
KRH69227	Soybean	cytosol	41.67	48.39
VIT_07s0005g01350.t01	Wine grape	cytosol	37.78	47.55
AT3G62550.1	Thale cress	cytosol	40.56	45.06
Bra014401.1-P	Field mustard	cytosol	40.0	44.17
CDY63308	Canola	cytosol	39.44	43.56
CDY11426	Canola	cytosol	39.44	43.56
CDX89141	Canola	cytosol	39.44	43.56
Os01t0303800-02	Rice	plasma membrane	43.89	43.41
Bra007683.1-P	Field mustard	cytosol	38.89	42.94
KRG96520	Soybean	cytosol	37.22	42.68
CDX76642	Canola	cytosol	38.33	42.07
Os12t0552400-01	Rice	cytosol	32.22	36.25
Os12t0552500-01	Rice	cytosol, extracellular, plasma membrane, plastid	32.22	34.32
Os02t0760500-01	Rice	cytosol	30.56	33.95
Os07t0673400-01	Rice	cytosol	32.22	33.92
Os01t0511100-01	Rice	plastid	28.33	30.54
Os10t0437500-01	Rice	cytosol, plasma membrane, plastid	26.67	26.52

Protein Annotations

Gene3D:3.40.50.620	MapMan:35.2	EntrezGene:4332595	ProteinID:ABF95520.1	ProteinID:BAF11796.1	ProteinID:BAS83802.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006950
GO:GO:0008150	InterPro:IPR014729	EnsemblPlantsGene:Os03g0305400	EnsemblPlants:Os03t0305400-01	PFAM:PF00582	PRINTS:PR01438
PANTHER:PTHR31964	PANTHER:PTHR31964:SF56	UniProt:Q10MK7	InterPro:Rossmann-like_a/b/a_fold	SUPFAM:SSF52402	UniParc:UPI0000DB498B
InterPro:Universal_stress_UspA	InterPro:UspA	RefSeq:XP_015632558.1	SEG:seg	:	:

Description

UspA domain containing protein. (Os03t0305400-01)

Coordinates

chr3:-:10839459..10840785

Molecular Weight (calculated)

18935.7 Da

IEP (calculated)

4.875

GRAVY (calculated)

0.042

Length

180 amino acids

Sequence
(BLAST)

001: MDRATEEETA ATGRRILVAV DEGDESVHAL KWCLASFAKR GGGGGAAPPD TIILLYVRPP PPTYSVLDAS GYVFSDEVAA AIDGYSKEVA EAVVEKAQKL
101: CTLYGKEVGG DGEAGHEMKV EVKVAVGDAR NVICQMADKL GADVLVMGSH GYGLFKRALL GSVSDYCVRN ANCPVLIVKS

Best Arabidopsis Sequence Match ( AT3G62550.1 )
(BLAST)

001: MEETKERKIV VAVDESEESM EALSWSLDNL FPYGSNNTLI LLYVKPPLPV YSSLDAAGFI VTGDPVAALK KYEYELVESV MARSRTVYQD YESDINIERR
101: VGRGDAKEVI CNAVQKLRVD MLVMGTHDYG FFKRALLGSV SEYCAKRVKC PVVIVKKQAQ DN

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93W91]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.