Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53924 | Canola | cytosol | 36.59 | 84.51 |
| CDX73846 | Canola | cytosol | 36.59 | 84.51 |
| CDY08484 | Canola | cytosol | 96.34 | 79.0 |
| Bra034800.1-P | Field mustard | cytosol | 95.73 | 78.5 |
| CDY47907 | Canola | cytosol | 85.37 | 70.0 |
| CDY08481 | Canola | cytosol | 85.37 | 70.0 |
| CDY27474 | Canola | cytosol | 23.17 | 59.38 |
| AT3G11930.3 | Thale cress | cytosol | 81.71 | 59.29 |
| VIT_08s0032g00590.t01 | Wine grape | cytosol, plastid | 45.73 | 58.14 |
| Solyc01g057000.2.1 | Tomato | cytosol | 47.56 | 45.35 |
| KRH71765 | Soybean | endoplasmic reticulum | 52.44 | 45.03 |
| PGSC0003DMT400084231 | Potato | cytosol | 48.17 | 44.13 |
| TraesCS5A01G389700.1 | Wheat | cytosol | 47.56 | 43.58 |
| CDX71957 | Canola | cytosol | 50.0 | 42.93 |
| CDY06041 | Canola | cytosol | 49.39 | 42.63 |
| CDX67744 | Canola | cytosol | 51.83 | 42.29 |
| CDX98295 | Canola | cytosol | 48.78 | 41.24 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 46.34 | 40.86 |
| TraesCS5D01G399600.1 | Wheat | cytosol | 45.73 | 40.32 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 46.95 | 40.31 |
| HORVU5Hr1G095180.3 | Barley | cytosol | 43.9 | 38.92 |
| TraesCS5B01G394700.1 | Wheat | cytosol | 43.9 | 38.92 |
| Os10t0437500-01 | Rice | cytosol, plasma membrane, plastid | 42.68 | 38.67 |
| HORVU5Hr1G095160.1 | Barley | peroxisome | 43.29 | 38.17 |
| Zm00001d034027_P001 | Maize | cytosol | 42.07 | 37.1 |
| TraesCS5A01G389500.1 | Wheat | cytosol | 40.85 | 36.61 |
| CDY55534 | Canola | cytosol | 35.98 | 36.42 |
| CDY53014 | Canola | cytosol | 35.37 | 35.8 |
| EER93447 | Sorghum | cytosol | 42.07 | 35.75 |
| CDX95730 | Canola | cytosol | 34.76 | 35.19 |
| CDX80128 | Canola | cytosol | 34.76 | 35.19 |
| CDX83322 | Canola | cytosol | 34.76 | 35.19 |
| TraesCS5A01G389400.2 | Wheat | cytosol | 42.68 | 33.65 |
| TraesCS5D01G399400.2 | Wheat | cytosol | 42.07 | 33.33 |
| TraesCS5B01G394600.1 | Wheat | cytosol | 43.9 | 33.03 |
| TraesCS5D01G399500.1 | Wheat | cytosol | 40.85 | 32.84 |
| HORVU5Hr1G047510.1 | Barley | cytosol | 37.8 | 32.8 |
| TraesCS5D01G156700.1 | Wheat | cytosol | 37.8 | 32.46 |
| TraesCS5A01G151500.2 | Wheat | cytosol | 37.8 | 32.29 |
| TraesCS5B01G150100.1 | Wheat | cytosol | 35.98 | 31.22 |
| CDY11426 | Canola | cytosol | 30.49 | 30.67 |
| CDY63308 | Canola | cytosol | 30.49 | 30.67 |
| CDX89141 | Canola | cytosol | 29.88 | 30.06 |
| CDY20676 | Canola | cytosol | 30.49 | 29.24 |
| CDY31068 | Canola | cytosol | 30.49 | 29.24 |
| CDX96035 | Canola | cytosol, peroxisome, plastid | 28.05 | 28.93 |
| CDY01904 | Canola | cytosol, peroxisome, plastid | 28.05 | 28.93 |
| CDY05645 | Canola | cytosol | 29.27 | 28.74 |
| CDX76642 | Canola | cytosol | 28.66 | 28.66 |
| CDY33932 | Canola | cytosol | 28.66 | 28.14 |
| CDX93484 | Canola | cytosol | 28.66 | 27.49 |
| CDX94953 | Canola | cytosol | 28.66 | 27.33 |
| CDY09876 | Canola | cytosol | 25.61 | 24.0 |
| CDY37513 | Canola | cytosol | 24.39 | 23.26 |
| CDY49062 | Canola | cytosol | 24.39 | 22.86 |
| CDX69566 | Canola | cytosol | 25.0 | 22.78 |
| OQU91731 | Sorghum | plastid | 43.29 | 22.47 |
Protein Annotations
| EnsemblPlants:CDY01070 | EnsemblPlantsGene:GSBRNA2T00111115001 | Gene3D:3.40.50.620 | GO:A0A078EG90 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF15 |
| PFAM:PF00582 | PRINTS:PR01438 | ProteinID:CDY01070 | ProteinID:CDY01070.1 | SEG:seg | SUPFAM:SSF52402 |
| UniParc:UPI0004EED2A1 | MapMan:35.2 | : | : | : | : |
Description
BnaC05g41300D
Coordinates
chrLK031923:+:1030743..1032373
Molecular Weight (calculated)
17855.8 Da
IEP (calculated)
6.871
GRAVY (calculated)
0.171
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAIDESDSS FYALQWVIDH FSTLLMTTEG AEAEGGLLTV VHVQPTFHHF APFPAGPGAT AVYPPSLMIE SVKKTQQETS AALVLRALQM CRAKQIRSET
101: LVFEGKAKEI ICQAVEQMHV DLLVVGSRGL GKIRRALIGS VSDYCAHHAN CPILIVKPPK EITS
101: LVFEGKAKEI ICQAVEQMHV DLLVVGSRGL GKIRRALIGS VSDYCAHHAN CPILIVKPPK EITS
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATAVYA
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK
101: SSSMIESVKK AQQETSAALL SRALQMCRAK QIRTETLVLE GEAKEMICEA VEKMHVDLLV VGSRGLGKIK RAFLGSVSDY CAHHANCPIL IVKPPKEMTK
Arabidopsis Description
AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.