Factsheet for TraesCS5D01G399600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G389700.1	Wheat	cytosol	90.86	94.41
HORVU5Hr1G095160.1	Barley	peroxisome	90.32	90.32
TraesCS5D01G399400.2	Wheat	cytosol	79.57	71.5
TraesCS5D01G399500.1	Wheat	cytosol	74.73	68.14
Zm00001d034027_P001	Maize	cytosol	66.13	66.13
CDX73846	Canola	cytosol	24.73	64.79
CDY53924	Canola	cytosol	24.73	64.79
EER93447	Sorghum	cytosol	63.44	61.14
VIT_08s0032g00590.t01	Wine grape	cytosol, plastid	33.87	48.84
CDY01070	Canola	cytosol	40.32	45.73
GSMUA_Achr2P08790_001	Banana	cytosol	44.62	44.62
Solyc01g057000.2.1	Tomato	cytosol	39.78	43.02
PGSC0003DMT400084231	Potato	cytosol	40.32	41.9
GSMUA_Achr3P25610_001	Banana	cytosol	43.01	41.88
Bra038688.1-P	Field mustard	cytosol	44.62	41.5
CDY08481	Canola	cytosol	44.09	41.0
CDY47907	Canola	cytosol	44.09	41.0
KRH71765	Soybean	endoplasmic reticulum	41.94	40.84
CDY08484	Canola	cytosol	43.55	40.5
Bra001427.1-P	Field mustard	cytosol	43.01	40.4
Bra034800.1-P	Field mustard	cytosol	43.01	40.0
TraesCS2D01G113000.1	Wheat	cytosol	37.63	39.55
TraesCS5D01G104200.1	Wheat	cytosol	34.95	38.46
AT3G11930.3	Thale cress	cytosol	46.24	38.05
TraesCS2D01G112300.1	Wheat	cytosol	34.95	37.57
TraesCS5D01G156700.1	Wheat	cytosol	38.17	37.17
TraesCS2D01G112900.1	Wheat	cytosol	35.48	36.67
CDX71957	Canola	cytosol	36.02	35.08
AT3G58450.1	Thale cress	cytosol	38.17	34.8
Bra007393.1-P	Field mustard	cytosol	35.48	34.74
CDY06041	Canola	cytosol	35.48	34.74
TraesCS6D01G293300.1	Wheat	cytosol	29.57	33.95
CDX67744	Canola	cytosol	36.56	33.83
Bra003338.1-P	Field mustard	cytosol	37.1	33.82
TraesCS2D01G502700.1	Wheat	cytosol, plastid	29.57	33.54
TraesCS4D01G186500.2	Wheat	cytosol	30.65	33.33
CDX98295	Canola	cytosol	33.33	31.96
TraesCS2D01G113100.1	Wheat	cytosol	34.95	29.55
TraesCS5D01G104300.1	Wheat	cytosol	31.18	28.86
TraesCS6D01G254400.1	Wheat	cytosol	25.27	26.55

Protein Annotations

EnsemblPlants:TraesCS5D01G399600.1	EnsemblPlantsGene:TraesCS5D01G399600	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF38	PFAM:PF00582
PRINTS:PR01438	SEG:seg	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:

Description

No Description!

Coordinates

chr5D:-:465030139..465031831

Molecular Weight (calculated)

19305.0 Da

IEP (calculated)

6.844

GRAVY (calculated)

0.072

Length

186 amino acids

Sequence
(BLAST)

001: MEEVSAEAAA VASGMAPGAG AGGAEGATMK VVAAVDASEE SLHALSWALD NVVRPHPGAS VVVVHVQHHA DHFAYPVAGH GLQYVPPTAV DSVRKTHEEN
101: SRRVVSAALD VCRQKQASAT AAVVEGDAKE AICRAVEDMH ADLLVLGSRG LGMIKRALLG SVSDYLVHHA SCPVLIVKPP NKAHHK

Best Arabidopsis Sequence Match ( AT3G11930.1 )
(BLAST)

001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK

Arabidopsis Description

AT3G11930 protein [Source:UniProtKB/TrEMBL;Acc:B9DG73]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.