Factsheet for TraesCS6D01G293300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G344000.1	Wheat	cytosol	98.15	98.15
TraesCS6A01G314000.1	Wheat	cytosol	92.59	92.59
Os02t0760500-01	Rice	cytosol	89.51	89.51
EES07563	Sorghum	cytosol	88.27	88.27
Zm00001d018135_P002	Maize	extracellular	87.65	87.65
GSMUA_Achr6P02230_001	Banana	cytosol	79.01	73.56
VIT_18s0001g07360.t01	Wine grape	cytosol	74.07	71.43
Solyc04g076200.2.1	Tomato	cytosol, extracellular, plastid	61.73	65.79
Bra030795.1-P	Field mustard	cytosol	56.79	64.79
AT1G09740.1	Thale cress	cytosol	67.28	63.74
CDY31068	Canola	cytosol	67.28	63.74
Bra019995.1-P	Field mustard	cytosol	66.67	63.16
CDX93484	Canola	cytosol	66.67	63.16
CDY20676	Canola	cytosol	66.67	63.16
CDX94953	Canola	cytosol	65.43	61.63
KRH16835	Soybean	cytosol, plastid	67.28	60.89
PGSC0003DMT400033576	Potato	cytosol	62.35	58.72
KRH72447	Soybean	cytosol	54.32	51.46
TraesCS2D01G502700.1	Wheat	cytosol, plastid	38.89	38.41
TraesCS4D01G186500.2	Wheat	cytosol	33.95	32.16
TraesCS5D01G104200.1	Wheat	cytosol	33.33	31.95
TraesCS5D01G399600.1	Wheat	cytosol	33.95	29.57
TraesCS2D01G113000.1	Wheat	cytosol	32.1	29.38
TraesCS2D01G112300.1	Wheat	cytosol	30.86	28.9
TraesCS5D01G399500.1	Wheat	cytosol	35.8	28.43
TraesCS2D01G112900.1	Wheat	cytosol	31.48	28.33
TraesCS6D01G254400.1	Wheat	cytosol	30.25	27.68
TraesCS5D01G399400.2	Wheat	cytosol	35.19	27.54
TraesCS2D01G113100.1	Wheat	cytosol	35.19	25.91
TraesCS5D01G156700.1	Wheat	cytosol	30.25	25.65
TraesCS5D01G104300.1	Wheat	cytosol	31.48	25.37

Protein Annotations

EnsemblPlants:TraesCS6D01G293300.1	EnsemblPlantsGene:TraesCS6D01G293300	Gene3D:3.40.50.620	GO:GO:0006950	GO:GO:0008150	InterPro:IPR014729
InterPro:Rossmann-like_a/b/a_fold	InterPro:Universal_stress_UspA	InterPro:UspA	PANTHER:PTHR31964	PANTHER:PTHR31964:SF2	PFAM:PF00582
PRINTS:PR01438	SUPFAM:SSF52402	TIGR:cd00293	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:+:404217110..404218994

Molecular Weight (calculated)

17083.0 Da

IEP (calculated)

7.344

GRAVY (calculated)

0.280

Length

162 amino acids

Sequence
(BLAST)

001: MATANLSSVV VAVDGSEESM KALRWALDSL RLRPDGALVV LHVQPPPGIA AGLNPGPIPF GGPSVAEVPA FTQAIESHQR RITEAILEHA LKICSDKNVE
101: VKTQVVVGDP KEKICEVAAE LKADLLVMGC RAFGPVKRMF LGSVSNYCIN SVGCPVVVIK GT

Best Arabidopsis Sequence Match ( AT1G09740.1 )
(BLAST)

001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A

Arabidopsis Description

Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.