Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0760500-01 | Rice | cytosol | 75.29 | 80.86 |
| TraesCS6D01G293300.1 | Wheat | cytosol | 73.56 | 79.01 |
| EES07563 | Sorghum | cytosol | 72.99 | 78.4 |
| TraesCS6B01G344000.1 | Wheat | cytosol | 72.41 | 77.78 |
| Zm00001d018135_P002 | Maize | extracellular | 71.84 | 77.16 |
| TraesCS6A01G314000.1 | Wheat | cytosol | 68.97 | 74.07 |
| VIT_18s0001g07360.t01 | Wine grape | cytosol | 71.26 | 73.81 |
| Solyc04g076200.2.1 | Tomato | cytosol, extracellular, plastid | 59.77 | 68.42 |
| AT1G09740.1 | Thale cress | cytosol | 66.09 | 67.25 |
| CDY31068 | Canola | cytosol | 65.52 | 66.67 |
| Bra019995.1-P | Field mustard | cytosol | 64.37 | 65.5 |
| CDY20676 | Canola | cytosol | 64.37 | 65.5 |
| CDX93484 | Canola | cytosol | 64.37 | 65.5 |
| Bra030795.1-P | Field mustard | cytosol | 53.45 | 65.49 |
| CDX94953 | Canola | cytosol | 63.79 | 64.53 |
| KRH16835 | Soybean | cytosol, plastid | 64.94 | 63.13 |
| PGSC0003DMT400033576 | Potato | cytosol | 61.49 | 62.21 |
| KRH72447 | Soybean | cytosol | 51.72 | 52.63 |
| GSMUA_Achr4P06800_001 | Banana | cytosol | 36.78 | 39.75 |
| GSMUA_Achr3P29470_001 | Banana | cytosol | 33.91 | 37.34 |
| GSMUA_Achr1P24830_001 | Banana | cytosol | 34.48 | 35.71 |
| GSMUA_Achr5P00180_001 | Banana | cytosol | 31.03 | 35.06 |
| GSMUA_Achr6P20400_001 | Banana | cytosol | 29.31 | 33.12 |
| GSMUA_Achr8P06640_001 | Banana | cytosol | 29.89 | 32.5 |
| GSMUA_Achr2P08790_001 | Banana | cytosol | 33.91 | 31.72 |
| GSMUA_Achr3P25610_001 | Banana | cytosol | 32.76 | 29.84 |
| GSMUA_Achr1P26770_001 | Banana | cytosol | 24.14 | 25.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P02230_001 | EnsemblPlants:GSMUA_Achr6T02230_001 | EnsemblPlantsGene:GSMUA_Achr6G02230_001 | Gene3D:3.40.50.620 | GO:GO:0006950 | GO:GO:0008150 |
| InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | InterPro:Universal_stress_UspA | InterPro:UspA | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF2 |
| PFAM:PF00582 | PRINTS:PR01438 | SEG:seg | SUPFAM:SSF52402 | UniParc:UPI000294D022 | UniProt:M0T3H1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G02230_001]
Coordinates
chr6:-:1433675..1437341
Molecular Weight (calculated)
18103.9 Da
IEP (calculated)
5.548
GRAVY (calculated)
0.247
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGNLGCVV VAVDGSEESM NGLRWAIDNL RLRPAGEGAD GAAEEAGALV VLHVQSPPSI AAGLNPGSVP FGGPDYIEVP AFTAAIEAHQ RRITEAIMTH
101: ALQICAGKDV NVKTQVVVGD PKEMICEVAT NLHADLLVMG SRAFGPIKRM FLGSVSNYCI NHANCPVVVI KGSS
101: ALQICAGKDV NVKTQVVVGD PKEMICEVAT NLHADLLVMG SRAFGPIKRM FLGSVSNYCI NHANCPVVVI KGSS
001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.