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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93484 Canola cytosol 97.67 98.25
AT1G09740.1 Thale cress cytosol 88.37 88.89
CDY31068 Canola cytosol 85.47 85.96
CDY20676 Canola cytosol 84.88 85.38
Os02t0760500-01 Rice cytosol 63.37 67.28
TraesCS6B01G344000.1 Wheat cytosol 62.79 66.67
VIT_18s0001g07360.t01 Wine grape cytosol 65.12 66.67
Zm00001d018135_P002 Maize extracellular 62.21 66.05
EES07563 Sorghum cytosol 61.63 65.43
TraesCS6D01G293300.1 Wheat cytosol 61.63 65.43
GSMUA_Achr6P02230_001 Banana cytosol 64.53 63.79
TraesCS6A01G314000.1 Wheat cytosol 59.88 63.58
Solyc04g076200.2.1 Tomato cytosol, extracellular, plastid 55.81 63.16
KRH16835 Soybean cytosol, plastid 63.37 60.89
PGSC0003DMT400033576 Potato cytosol 55.81 55.81
KRH72447 Soybean cytosol 49.42 49.71
CDY27474 Canola cytosol 17.44 46.88
CDX73846 Canola cytosol 19.19 46.48
CDY53924 Canola cytosol 19.19 46.48
CDY11426 Canola cytosol 34.88 36.81
CDX89141 Canola cytosol 33.72 35.58
CDY63308 Canola cytosol 33.72 35.58
CDX76642 Canola cytosol 33.72 35.37
CDY55534 Canola cytosol 32.56 34.57
CDX80128 Canola cytosol 31.98 33.95
CDX95730 Canola cytosol 31.98 33.95
CDY53014 Canola cytosol 31.98 33.95
CDX83322 Canola cytosol 31.98 33.95
CDY01904 Canola cytosol, peroxisome, plastid 30.81 33.33
CDX96035 Canola cytosol, peroxisome, plastid 30.81 33.33
CDY33932 Canola cytosol 31.98 32.93
CDY05645 Canola cytosol 31.98 32.93
CDY06041 Canola cytosol 31.98 28.95
CDY01070 Canola cytosol 27.33 28.66
CDX71957 Canola cytosol 31.4 28.27
CDX67744 Canola cytosol 31.98 27.36
CDX98295 Canola cytosol 28.49 25.26
CDY37513 Canola cytosol 25.0 25.0
CDY49062 Canola cytosol 25.0 24.57
CDY47907 Canola cytosol 28.49 24.5
CDY08481 Canola cytosol 28.49 24.5
CDY08484 Canola cytosol 27.91 24.0
CDY09876 Canola cytosol 23.84 23.43
CDX69566 Canola cytosol 23.84 22.78
Protein Annotations
EnsemblPlants:CDX94953EnsemblPlantsGene:GSBRNA2T00100437001Gene3D:3.40.50.620GO:A0A078E6F1GO:GO:0006950GO:GO:0008150
InterPro:IPR014729InterPro:Rossmann-like_a/b/a_foldInterPro:Universal_stress_UspAInterPro:UspAPANTHER:PTHR31964PANTHER:PTHR31964:SF2
PFAM:PF00582PRINTS:PR01438ProteinID:CDX94953ProteinID:CDX94953.1SEG:segSUPFAM:SSF52402
UniParc:UPI0004EE4225MapMan:35.2::::
Description
BnaC05g07180D
Coordinates
chrLK031886:-:330376..331351
Molecular Weight (calculated)
18437.2 Da
IEP (calculated)
7.236
GRAVY (calculated)
0.073
Length
172 amino acids
Sequence
(BLAST)
001: MDMSGRSLTC VVVAVDGSEV SMEALRWALD NLKLSSSSSE SSFVVLHVQP SPSVAAGVSP GTIPFGGPSG LEVPAFTAAI EQHHKRITDT IMDHARLIFA
101: DRSVNVKTQV VVGDPKYKIC ETVENLHADL LVIGSRAHGR IKRMFLGSVS NYCSNHVHCP VVIIKPKGDS SE
Best Arabidopsis Sequence Match ( AT1G09740.1 )
(BLAST)
001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A
Arabidopsis Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.