Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94953 | Canola | cytosol | 88.89 | 88.37 |
| CDX93484 | Canola | cytosol | 87.72 | 87.72 |
| Bra019995.1-P | Field mustard | cytosol | 87.72 | 87.72 |
| VIT_18s0001g07360.t01 | Wine grape | cytosol | 69.59 | 70.83 |
| Os02t0760500-01 | Rice | cytosol | 65.5 | 69.14 |
| Solyc04g076200.2.1 | Tomato | cytosol, extracellular, plastid | 61.4 | 69.08 |
| EES07563 | Sorghum | cytosol | 64.91 | 68.52 |
| Zm00001d018135_P002 | Maize | extracellular | 64.33 | 67.9 |
| TraesCS6B01G344000.1 | Wheat | cytosol | 64.33 | 67.9 |
| TraesCS6D01G293300.1 | Wheat | cytosol | 63.74 | 67.28 |
| GSMUA_Achr6P02230_001 | Banana | cytosol | 67.25 | 66.09 |
| TraesCS6A01G314000.1 | Wheat | cytosol | 61.4 | 64.81 |
| KRH16835 | Soybean | cytosol, plastid | 66.67 | 63.69 |
| PGSC0003DMT400033576 | Potato | cytosol | 60.82 | 60.47 |
| KRH72447 | Soybean | cytosol | 52.05 | 52.05 |
| AT2G47710.1 | Thale cress | cytosol | 33.92 | 35.8 |
| AT1G68300.1 | Thale cress | cytosol, peroxisome, plastid | 33.33 | 35.62 |
| AT3G62550.1 | Thale cress | cytosol | 33.33 | 35.19 |
| AT3G58450.1 | Thale cress | cytosol | 36.26 | 30.39 |
| AT3G01520.1 | Thale cress | cytosol | 28.66 | 28.0 |
| AT3G11930.3 | Thale cress | cytosol | 35.09 | 26.55 |
| AT5G49050.1 | Thale cress | cytosol | 22.81 | 26.0 |
| AT5G14680.1 | Thale cress | cytosol, nucleus, plastid | 26.32 | 25.71 |
Protein Annotations
| Gene3D:3.40.50.620 | MapMan:35.2 | EntrezGene:837502 | UniProt:A0A178WG91 | ProteinID:AEE28487.1 | EMBL:AK228228 |
| ProteinID:ANM59132.1 | ArrayExpress:AT1G09740 | EnsemblPlantsGene:AT1G09740 | RefSeq:AT1G09740 | TAIR:AT1G09740 | RefSeq:AT1G09740-TAIR-G |
| EnsemblPlants:AT1G09740.1 | TAIR:AT1G09740.1 | EMBL:BT005843 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0016787 | InterPro:IPR014729 | RefSeq:NP_001318966.1 | RefSeq:NP_172445.2 | ProteinID:OAP17399.1 |
| PFAM:PF00582 | PO:PO:0000013 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01438 | PANTHER:PTHR31964 |
| PANTHER:PTHR31964:SF2 | UniProt:Q84TF6 | InterPro:Rossmann-like_a/b/a_fold | SUPFAM:SSF52402 | UniParc:UPI0000060D66 | InterPro:Universal_stress_UspA |
| InterPro:UspA | SEG:seg | : | : | : | : |
Description
Adenine nucleotide alpha hydrolases-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84TF6]
Coordinates
chr1:+:3154390..3156376
Molecular Weight (calculated)
18150.7 Da
IEP (calculated)
6.500
GRAVY (calculated)
0.099
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSGSLNCV VVAVDGSEVS MEALRWALDN LKLSSSSSDS SFVVLHVQPS PSVAAGVSPG TIPFGGPSGL EVPAFTAAIE QHQKRITDTI LEHASQICAE
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A
101: KSVNVKTQVV IGDPKYKICE AVENLHADLL VMGSRAYGRI KRMFLGSVSN YCTNHAHCPV VIIKPKEDSS A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.